Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
COL23A1Q86Y22 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC22.94■■□□□ 1.26
COL23A1Q86Y22 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
COL23A1Q86Y22 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC22.94■■□□□ 1.26
COL23A1Q86Y22 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
COL23A1Q86Y22 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC22.94■■□□□ 1.26
COL23A1Q86Y22 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC22.94■■□□□ 1.26
COL23A1Q86Y22 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC22.94■■□□□ 1.26
COL23A1Q86Y22 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC22.94■■□□□ 1.26
COL23A1Q86Y22 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC22.94■■□□□ 1.26
COL23A1Q86Y22 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
COL23A1Q86Y22 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
COL23A1Q86Y22 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
COL23A1Q86Y22 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
COL23A1Q86Y22 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC22.94■■□□□ 1.26
COL23A1Q86Y22 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
COL23A1Q86Y22 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC22.94■■□□□ 1.26
COL23A1Q86Y22 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC22.94■■□□□ 1.26
COL23A1Q86Y22 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC22.94■■□□□ 1.26
COL23A1Q86Y22 KRT18P27-201ENST00000427733 1299 ntBASIC22.94■■□□□ 1.26
COL23A1Q86Y22 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC22.94■■□□□ 1.26
COL23A1Q86Y22 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC22.94■■□□□ 1.26
COL23A1Q86Y22 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC22.94■■□□□ 1.26
COL23A1Q86Y22 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC22.94■■□□□ 1.26
COL23A1Q86Y22 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC22.94■■□□□ 1.26
COL23A1Q86Y22 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
COL23A1Q86Y22 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC22.94■■□□□ 1.26
COL23A1Q86Y22 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC22.94■■□□□ 1.26
COL23A1Q86Y22 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
COL23A1Q86Y22 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
COL23A1Q86Y22 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
COL23A1Q86Y22 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC22.94■■□□□ 1.26
COL23A1Q86Y22 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC22.93■■□□□ 1.26
COL23A1Q86Y22 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
COL23A1Q86Y22 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
COL23A1Q86Y22 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC22.93■■□□□ 1.26
COL23A1Q86Y22 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC22.93■■□□□ 1.26
COL23A1Q86Y22 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC22.93■■□□□ 1.26
COL23A1Q86Y22 CTNS-203ENST00000399306 803 ntTSL 3 BASIC22.93■■□□□ 1.26
COL23A1Q86Y22 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC22.93■■□□□ 1.26
COL23A1Q86Y22 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC22.93■■□□□ 1.26
COL23A1Q86Y22 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC22.93■■□□□ 1.26
COL23A1Q86Y22 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC22.93■■□□□ 1.26
COL23A1Q86Y22 ORC5-208ENST00000626700 344 ntTSL 3 BASIC22.93■■□□□ 1.26
COL23A1Q86Y22 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC22.93■■□□□ 1.26
COL23A1Q86Y22 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC22.93■■□□□ 1.26
COL23A1Q86Y22 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC22.93■■□□□ 1.26
COL23A1Q86Y22 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC22.93■■□□□ 1.26
COL23A1Q86Y22 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC22.93■■□□□ 1.26
COL23A1Q86Y22 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
COL23A1Q86Y22 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
COL23A1Q86Y22 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
COL23A1Q86Y22 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
COL23A1Q86Y22 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
COL23A1Q86Y22 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC22.92■■□□□ 1.26
COL23A1Q86Y22 AL024508.2-201ENST00000607749 1894 ntBASIC22.92■■□□□ 1.26
COL23A1Q86Y22 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC22.92■■□□□ 1.26
COL23A1Q86Y22 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
COL23A1Q86Y22 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC22.92■■□□□ 1.26
COL23A1Q86Y22 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC22.92■■□□□ 1.26
COL23A1Q86Y22 AC073621.1-201ENST00000392730 636 ntBASIC22.92■■□□□ 1.26
COL23A1Q86Y22 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
COL23A1Q86Y22 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC22.92■■□□□ 1.26
COL23A1Q86Y22 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC22.92■■□□□ 1.26
COL23A1Q86Y22 BX005266.1-201ENST00000473402 457 ntBASIC22.92■■□□□ 1.26
COL23A1Q86Y22 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC22.92■■□□□ 1.26
COL23A1Q86Y22 AC092865.6-201ENST00000642101 219 ntBASIC22.92■■□□□ 1.26
COL23A1Q86Y22 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC22.92■■□□□ 1.26
COL23A1Q86Y22 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
COL23A1Q86Y22 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC22.92■■□□□ 1.26
COL23A1Q86Y22 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC22.92■■□□□ 1.26
COL23A1Q86Y22 ASL-204ENST00000395331 1538 ntTSL 5 BASIC22.92■■□□□ 1.26
COL23A1Q86Y22 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC22.92■■□□□ 1.26
COL23A1Q86Y22 AC009102.3-201ENST00000623118 1491 ntBASIC22.92■■□□□ 1.26
COL23A1Q86Y22 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
COL23A1Q86Y22 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
COL23A1Q86Y22 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC22.91■■□□□ 1.26
COL23A1Q86Y22 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
COL23A1Q86Y22 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
COL23A1Q86Y22 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
COL23A1Q86Y22 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
COL23A1Q86Y22 MIR770-201ENST00000390219 98 ntBASIC22.91■■□□□ 1.26
COL23A1Q86Y22 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC22.91■■□□□ 1.26
COL23A1Q86Y22 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC22.91■■□□□ 1.26
COL23A1Q86Y22 AC108751.1-201ENST00000490852 363 ntBASIC22.91■■□□□ 1.26
COL23A1Q86Y22 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC22.91■■□□□ 1.26
COL23A1Q86Y22 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
COL23A1Q86Y22 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
COL23A1Q86Y22 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC22.91■■□□□ 1.26
COL23A1Q86Y22 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC22.91■■□□□ 1.26
COL23A1Q86Y22 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC22.91■■□□□ 1.26
COL23A1Q86Y22 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
COL23A1Q86Y22 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC22.9■■□□□ 1.26
COL23A1Q86Y22 AC097374.2-201ENST00000618617 1306 ntBASIC22.9■■□□□ 1.26
COL23A1Q86Y22 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
COL23A1Q86Y22 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC22.9■■□□□ 1.26
COL23A1Q86Y22 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
COL23A1Q86Y22 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC22.9■■□□□ 1.26
COL23A1Q86Y22 SYS1-203ENST00000414310 795 ntTSL 3 BASIC22.9■■□□□ 1.26
COL23A1Q86Y22 WDR53-203ENST00000429115 683 ntTSL 2 BASIC22.9■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 12.8 ms