Protein–RNA interactions for Protein: Q86V81

ALYREF, THO complex subunit 4, humanhuman

Known RBP Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALYREFQ86V81 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ALYREFQ86V81 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC19.21■□□□□ 0.67
ALYREFQ86V81 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ALYREFQ86V81 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
ALYREFQ86V81 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ALYREFQ86V81 HES2-202ENST00000377836 507 ntTSL 2 BASIC19.21■□□□□ 0.67
ALYREFQ86V81 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
ALYREFQ86V81 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ALYREFQ86V81 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
ALYREFQ86V81 COX20P2-201ENST00000452636 358 ntBASIC19.21■□□□□ 0.67
ALYREFQ86V81 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC19.21■□□□□ 0.67
ALYREFQ86V81 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ALYREFQ86V81 PIN1-206ENST00000587625 878 ntTSL 2 BASIC19.21■□□□□ 0.67
ALYREFQ86V81 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC19.21■□□□□ 0.67
ALYREFQ86V81 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
ALYREFQ86V81 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
ALYREFQ86V81 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC19.21■□□□□ 0.67
ALYREFQ86V81 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC19.21■□□□□ 0.67
ALYREFQ86V81 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
ALYREFQ86V81 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC19.2■□□□□ 0.66
ALYREFQ86V81 AL161938.1-201ENST00000569833 2180 ntBASIC19.2■□□□□ 0.66
ALYREFQ86V81 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
ALYREFQ86V81 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC19.2■□□□□ 0.66
ALYREFQ86V81 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
ALYREFQ86V81 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC19.2■□□□□ 0.66
ALYREFQ86V81 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
ALYREFQ86V81 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ALYREFQ86V81 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ALYREFQ86V81 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
ALYREFQ86V81 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC19.2■□□□□ 0.66
ALYREFQ86V81 LBH-203ENST00000404397 543 ntTSL 4 BASIC19.2■□□□□ 0.66
ALYREFQ86V81 LBH-204ENST00000406087 559 ntTSL 4 BASIC19.2■□□□□ 0.66
ALYREFQ86V81 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC19.2■□□□□ 0.66
ALYREFQ86V81 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC19.2■□□□□ 0.66
ALYREFQ86V81 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC19.2■□□□□ 0.66
ALYREFQ86V81 NEK4P2-201ENST00000580004 1012 ntBASIC19.2■□□□□ 0.66
ALYREFQ86V81 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
ALYREFQ86V81 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC19.2■□□□□ 0.66
ALYREFQ86V81 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19.2■□□□□ 0.66
ALYREFQ86V81 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ALYREFQ86V81 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
ALYREFQ86V81 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
ALYREFQ86V81 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ALYREFQ86V81 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
ALYREFQ86V81 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ALYREFQ86V81 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
ALYREFQ86V81 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC19.2■□□□□ 0.66
ALYREFQ86V81 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
ALYREFQ86V81 AP006587.1-201ENST00000534129 1502 ntBASIC19.2■□□□□ 0.66
ALYREFQ86V81 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ALYREFQ86V81 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
ALYREFQ86V81 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ALYREFQ86V81 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
ALYREFQ86V81 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
ALYREFQ86V81 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC19.19■□□□□ 0.66
ALYREFQ86V81 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ALYREFQ86V81 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
ALYREFQ86V81 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ALYREFQ86V81 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
ALYREFQ86V81 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC19.19■□□□□ 0.66
ALYREFQ86V81 RPL13AP23-201ENST00000480739 586 ntBASIC19.19■□□□□ 0.66
ALYREFQ86V81 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC19.19■□□□□ 0.66
ALYREFQ86V81 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC19.19■□□□□ 0.66
ALYREFQ86V81 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC19.19■□□□□ 0.66
ALYREFQ86V81 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ALYREFQ86V81 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
ALYREFQ86V81 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
ALYREFQ86V81 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ALYREFQ86V81 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
ALYREFQ86V81 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC19.19■□□□□ 0.66
ALYREFQ86V81 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ALYREFQ86V81 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ALYREFQ86V81 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC19.19■□□□□ 0.66
ALYREFQ86V81 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
ALYREFQ86V81 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC19.19■□□□□ 0.66
ALYREFQ86V81 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ALYREFQ86V81 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
ALYREFQ86V81 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
ALYREFQ86V81 AP001271.2-201ENST00000624018 1556 ntBASIC19.19■□□□□ 0.66
ALYREFQ86V81 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ALYREFQ86V81 ZNF259P1-201ENST00000407656 1365 ntBASIC19.19■□□□□ 0.66
ALYREFQ86V81 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
ALYREFQ86V81 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ALYREFQ86V81 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
ALYREFQ86V81 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ALYREFQ86V81 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ALYREFQ86V81 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ALYREFQ86V81 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
ALYREFQ86V81 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
ALYREFQ86V81 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC19.18■□□□□ 0.66
ALYREFQ86V81 KRT8P17-201ENST00000453110 1448 ntBASIC19.18■□□□□ 0.66
ALYREFQ86V81 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
ALYREFQ86V81 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC19.18■□□□□ 0.66
ALYREFQ86V81 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ALYREFQ86V81 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
ALYREFQ86V81 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ALYREFQ86V81 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ALYREFQ86V81 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
ALYREFQ86V81 USP49-202ENST00000373010 2446 ntTSL 5 BASIC19.18■□□□□ 0.66
ALYREFQ86V81 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms