Protein–RNA interactions for Protein: Q86UV5

USP48, Ubiquitin carboxyl-terminal hydrolase 48, humanhuman

Predictions only

Length 1,035 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP48Q86UV5 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
USP48Q86UV5 AC074051.2-201ENST00000565115 352 ntBASIC22.46■■□□□ 1.19
USP48Q86UV5 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC22.46■■□□□ 1.19
USP48Q86UV5 AL353801.3-201ENST00000609898 542 ntBASIC22.46■■□□□ 1.19
USP48Q86UV5 AC117500.6-201ENST00000624871 588 ntBASIC22.46■■□□□ 1.19
USP48Q86UV5 VPS51-217ENST00000639871 243 ntTSL 5 BASIC22.46■■□□□ 1.19
USP48Q86UV5 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
USP48Q86UV5 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
USP48Q86UV5 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC22.46■■□□□ 1.19
USP48Q86UV5 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
USP48Q86UV5 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
USP48Q86UV5 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
USP48Q86UV5 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
USP48Q86UV5 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC22.46■■□□□ 1.19
USP48Q86UV5 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC22.46■■□□□ 1.19
USP48Q86UV5 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC22.46■■□□□ 1.19
USP48Q86UV5 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC22.46■■□□□ 1.19
USP48Q86UV5 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC22.46■■□□□ 1.19
USP48Q86UV5 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.19
USP48Q86UV5 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC22.45■■□□□ 1.18
USP48Q86UV5 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
USP48Q86UV5 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
USP48Q86UV5 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
USP48Q86UV5 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
USP48Q86UV5 TSPY12P-201ENST00000421279 868 ntBASIC22.45■■□□□ 1.18
USP48Q86UV5 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC22.45■■□□□ 1.18
USP48Q86UV5 MIR3917-201ENST00000580971 93 ntBASIC22.45■■□□□ 1.18
USP48Q86UV5 AC112497.1-201ENST00000624824 639 ntBASIC22.45■■□□□ 1.18
USP48Q86UV5 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC22.45■■□□□ 1.18
USP48Q86UV5 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
USP48Q86UV5 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
USP48Q86UV5 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
USP48Q86UV5 AC026471.1-201ENST00000564629 3026 ntBASIC22.45■■□□□ 1.18
USP48Q86UV5 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
USP48Q86UV5 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC22.45■■□□□ 1.18
USP48Q86UV5 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC22.45■■□□□ 1.18
USP48Q86UV5 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
USP48Q86UV5 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
USP48Q86UV5 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
USP48Q86UV5 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC22.45■■□□□ 1.18
USP48Q86UV5 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC22.45■■□□□ 1.18
USP48Q86UV5 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
USP48Q86UV5 AC009113.1-201ENST00000570267 2443 ntBASIC22.45■■□□□ 1.18
USP48Q86UV5 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC22.45■■□□□ 1.18
USP48Q86UV5 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC22.44■■□□□ 1.18
USP48Q86UV5 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
USP48Q86UV5 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC22.44■■□□□ 1.18
USP48Q86UV5 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
USP48Q86UV5 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
USP48Q86UV5 KRT18P13-201ENST00000400056 1290 ntBASIC22.44■■□□□ 1.18
USP48Q86UV5 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC22.44■■□□□ 1.18
USP48Q86UV5 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC22.44■■□□□ 1.18
USP48Q86UV5 RPP21-221ENST00000428040 594 ntTSL 2 BASIC22.44■■□□□ 1.18
USP48Q86UV5 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
USP48Q86UV5 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
USP48Q86UV5 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC22.44■■□□□ 1.18
USP48Q86UV5 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC22.44■■□□□ 1.18
USP48Q86UV5 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
USP48Q86UV5 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC22.44■■□□□ 1.18
USP48Q86UV5 LINC00167-201ENST00000530583 1419 ntBASIC22.44■■□□□ 1.18
USP48Q86UV5 UBC-206ENST00000538617 1303 ntTSL 5 BASIC22.44■■□□□ 1.18
USP48Q86UV5 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
USP48Q86UV5 AC141586.3-201ENST00000562166 1838 ntBASIC22.44■■□□□ 1.18
USP48Q86UV5 MIR3180-5-201ENST00000583743 153 ntBASIC22.44■■□□□ 1.18
USP48Q86UV5 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC22.44■■□□□ 1.18
USP48Q86UV5 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC22.44■■□□□ 1.18
USP48Q86UV5 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC22.44■■□□□ 1.18
USP48Q86UV5 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC22.44■■□□□ 1.18
USP48Q86UV5 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC22.44■■□□□ 1.18
USP48Q86UV5 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC22.44■■□□□ 1.18
USP48Q86UV5 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
USP48Q86UV5 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC22.44■■□□□ 1.18
USP48Q86UV5 AC005082.1-201ENST00000413042 2259 ntBASIC22.43■■□□□ 1.18
USP48Q86UV5 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC22.43■■□□□ 1.18
USP48Q86UV5 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
USP48Q86UV5 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
USP48Q86UV5 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
USP48Q86UV5 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC22.43■■□□□ 1.18
USP48Q86UV5 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC22.43■■□□□ 1.18
USP48Q86UV5 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
USP48Q86UV5 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC22.43■■□□□ 1.18
USP48Q86UV5 Z83836.1-201ENST00000624605 1642 ntBASIC22.43■■□□□ 1.18
USP48Q86UV5 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
USP48Q86UV5 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
USP48Q86UV5 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC22.43■■□□□ 1.18
USP48Q86UV5 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
USP48Q86UV5 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC22.43■■□□□ 1.18
USP48Q86UV5 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC22.43■■□□□ 1.18
USP48Q86UV5 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
USP48Q86UV5 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
USP48Q86UV5 MIR574-201ENST00000385209 96 ntBASIC22.43■■□□□ 1.18
USP48Q86UV5 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC22.43■■□□□ 1.18
USP48Q86UV5 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC22.43■■□□□ 1.18
USP48Q86UV5 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC22.43■■□□□ 1.18
USP48Q86UV5 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC22.43■■□□□ 1.18
USP48Q86UV5 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC22.43■■□□□ 1.18
USP48Q86UV5 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC22.43■■□□□ 1.18
USP48Q86UV5 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC22.43■■□□□ 1.18
USP48Q86UV5 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
USP48Q86UV5 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms