Protein–RNA interactions for Protein: Q6NVH7

SWSAP1, ATPase SWSAP1, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SWSAP1Q6NVH7 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC20.4■□□□□ 0.86
SWSAP1Q6NVH7 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC20.4■□□□□ 0.86
SWSAP1Q6NVH7 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SWSAP1Q6NVH7 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
SWSAP1Q6NVH7 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
SWSAP1Q6NVH7 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC20.39■□□□□ 0.86
SWSAP1Q6NVH7 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC20.39■□□□□ 0.86
SWSAP1Q6NVH7 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC20.39■□□□□ 0.85
SWSAP1Q6NVH7 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SWSAP1Q6NVH7 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC20.39■□□□□ 0.85
SWSAP1Q6NVH7 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
SWSAP1Q6NVH7 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SWSAP1Q6NVH7 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SWSAP1Q6NVH7 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SWSAP1Q6NVH7 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC20.39■□□□□ 0.85
SWSAP1Q6NVH7 TOB2P1-201ENST00000469761 992 ntBASIC20.39■□□□□ 0.85
SWSAP1Q6NVH7 RN7SL606P-201ENST00000472779 293 ntBASIC20.39■□□□□ 0.85
SWSAP1Q6NVH7 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC20.39■□□□□ 0.85
SWSAP1Q6NVH7 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC20.39■□□□□ 0.85
SWSAP1Q6NVH7 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SWSAP1Q6NVH7 AP000867.3-201ENST00000524675 377 ntBASIC20.39■□□□□ 0.85
SWSAP1Q6NVH7 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC20.39■□□□□ 0.85
SWSAP1Q6NVH7 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC20.39■□□□□ 0.85
SWSAP1Q6NVH7 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC20.39■□□□□ 0.85
SWSAP1Q6NVH7 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
SWSAP1Q6NVH7 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC20.39■□□□□ 0.85
SWSAP1Q6NVH7 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC20.39■□□□□ 0.85
SWSAP1Q6NVH7 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC20.39■□□□□ 0.85
SWSAP1Q6NVH7 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC20.39■□□□□ 0.85
SWSAP1Q6NVH7 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SWSAP1Q6NVH7 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SWSAP1Q6NVH7 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC20.39■□□□□ 0.85
SWSAP1Q6NVH7 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
SWSAP1Q6NVH7 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SWSAP1Q6NVH7 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
SWSAP1Q6NVH7 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
SWSAP1Q6NVH7 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SWSAP1Q6NVH7 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SWSAP1Q6NVH7 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
SWSAP1Q6NVH7 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SWSAP1Q6NVH7 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC20.38■□□□□ 0.85
SWSAP1Q6NVH7 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
SWSAP1Q6NVH7 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC20.38■□□□□ 0.85
SWSAP1Q6NVH7 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
SWSAP1Q6NVH7 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SWSAP1Q6NVH7 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SWSAP1Q6NVH7 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC20.38■□□□□ 0.85
SWSAP1Q6NVH7 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SWSAP1Q6NVH7 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC20.38■□□□□ 0.85
SWSAP1Q6NVH7 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SWSAP1Q6NVH7 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SWSAP1Q6NVH7 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SWSAP1Q6NVH7 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
SWSAP1Q6NVH7 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC20.38■□□□□ 0.85
SWSAP1Q6NVH7 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC20.38■□□□□ 0.85
SWSAP1Q6NVH7 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC20.38■□□□□ 0.85
SWSAP1Q6NVH7 AC113404.2-201ENST00000507884 177 ntBASIC20.38■□□□□ 0.85
SWSAP1Q6NVH7 SKP2-204ENST00000508514 821 ntTSL 3 BASIC20.38■□□□□ 0.85
SWSAP1Q6NVH7 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC20.38■□□□□ 0.85
SWSAP1Q6NVH7 AC008687.5-201ENST00000593746 558 ntBASIC20.38■□□□□ 0.85
SWSAP1Q6NVH7 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC20.38■□□□□ 0.85
SWSAP1Q6NVH7 AL592071.1-201ENST00000611956 408 ntBASIC20.38■□□□□ 0.85
SWSAP1Q6NVH7 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
SWSAP1Q6NVH7 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC20.38■□□□□ 0.85
SWSAP1Q6NVH7 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SWSAP1Q6NVH7 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SWSAP1Q6NVH7 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SWSAP1Q6NVH7 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
SWSAP1Q6NVH7 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SWSAP1Q6NVH7 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC20.37■□□□□ 0.85
SWSAP1Q6NVH7 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SWSAP1Q6NVH7 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SWSAP1Q6NVH7 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SWSAP1Q6NVH7 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SWSAP1Q6NVH7 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SWSAP1Q6NVH7 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
SWSAP1Q6NVH7 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC20.37■□□□□ 0.85
SWSAP1Q6NVH7 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SWSAP1Q6NVH7 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
SWSAP1Q6NVH7 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC20.37■□□□□ 0.85
SWSAP1Q6NVH7 PRR29-207ENST00000580752 458 ntTSL 3 BASIC20.37■□□□□ 0.85
SWSAP1Q6NVH7 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC20.37■□□□□ 0.85
SWSAP1Q6NVH7 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
SWSAP1Q6NVH7 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SWSAP1Q6NVH7 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC20.36■□□□□ 0.85
SWSAP1Q6NVH7 BX323043.1-201ENST00000641006 1765 ntBASIC20.36■□□□□ 0.85
SWSAP1Q6NVH7 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
SWSAP1Q6NVH7 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC20.36■□□□□ 0.85
SWSAP1Q6NVH7 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SWSAP1Q6NVH7 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC20.36■□□□□ 0.85
SWSAP1Q6NVH7 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
SWSAP1Q6NVH7 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SWSAP1Q6NVH7 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SWSAP1Q6NVH7 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SWSAP1Q6NVH7 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC20.36■□□□□ 0.85
SWSAP1Q6NVH7 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SWSAP1Q6NVH7 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC20.36■□□□□ 0.85
SWSAP1Q6NVH7 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC20.36■□□□□ 0.85
SWSAP1Q6NVH7 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
SWSAP1Q6NVH7 PRELID1P1-202ENST00000567272 903 ntBASIC20.36■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms