Protein–RNA interactions for Protein: Q6NUK4

REEP3, Receptor expression-enhancing protein 3, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
REEP3Q6NUK4 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
REEP3Q6NUK4 HR-201ENST00000312841 5351 ntTSL 5 BASIC17.12■□□□□ 0.33
REEP3Q6NUK4 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
REEP3Q6NUK4 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
REEP3Q6NUK4 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
REEP3Q6NUK4 AL163051.1-201ENST00000569214 1512 ntBASIC17.12■□□□□ 0.33
REEP3Q6NUK4 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
REEP3Q6NUK4 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
REEP3Q6NUK4 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
REEP3Q6NUK4 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC17.12■□□□□ 0.33
REEP3Q6NUK4 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC17.12■□□□□ 0.33
REEP3Q6NUK4 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
REEP3Q6NUK4 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
REEP3Q6NUK4 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
REEP3Q6NUK4 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
REEP3Q6NUK4 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
REEP3Q6NUK4 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
REEP3Q6NUK4 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
REEP3Q6NUK4 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC17.12■□□□□ 0.33
REEP3Q6NUK4 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC17.12■□□□□ 0.33
REEP3Q6NUK4 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC17.12■□□□□ 0.33
REEP3Q6NUK4 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC17.12■□□□□ 0.33
REEP3Q6NUK4 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC17.12■□□□□ 0.33
REEP3Q6NUK4 AC113410.3-201ENST00000623366 203 ntBASIC17.12■□□□□ 0.33
REEP3Q6NUK4 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC17.12■□□□□ 0.33
REEP3Q6NUK4 AL049637.2-201ENST00000641778 930 ntBASIC17.12■□□□□ 0.33
REEP3Q6NUK4 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
REEP3Q6NUK4 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
REEP3Q6NUK4 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
REEP3Q6NUK4 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
REEP3Q6NUK4 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
REEP3Q6NUK4 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
REEP3Q6NUK4 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
REEP3Q6NUK4 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
REEP3Q6NUK4 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
REEP3Q6NUK4 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
REEP3Q6NUK4 PHGDH-209ENST00000641074 1780 ntBASIC17.12■□□□□ 0.33
REEP3Q6NUK4 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
REEP3Q6NUK4 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
REEP3Q6NUK4 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
REEP3Q6NUK4 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
REEP3Q6NUK4 CYP51A1P1-201ENST00000492267 1507 ntBASIC17.11■□□□□ 0.33
REEP3Q6NUK4 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC17.11■□□□□ 0.33
REEP3Q6NUK4 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
REEP3Q6NUK4 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
REEP3Q6NUK4 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
REEP3Q6NUK4 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
REEP3Q6NUK4 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
REEP3Q6NUK4 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
REEP3Q6NUK4 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
REEP3Q6NUK4 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
REEP3Q6NUK4 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
REEP3Q6NUK4 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
REEP3Q6NUK4 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
REEP3Q6NUK4 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
REEP3Q6NUK4 AL355355.2-201ENST00000442321 338 ntBASIC17.11■□□□□ 0.33
REEP3Q6NUK4 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
REEP3Q6NUK4 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
REEP3Q6NUK4 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC17.11■□□□□ 0.33
REEP3Q6NUK4 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC17.11■□□□□ 0.33
REEP3Q6NUK4 AC233702.5-201ENST00000584107 538 ntBASIC17.11■□□□□ 0.33
REEP3Q6NUK4 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
REEP3Q6NUK4 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
REEP3Q6NUK4 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
REEP3Q6NUK4 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
REEP3Q6NUK4 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
REEP3Q6NUK4 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
REEP3Q6NUK4 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
REEP3Q6NUK4 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
REEP3Q6NUK4 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
REEP3Q6NUK4 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
REEP3Q6NUK4 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
REEP3Q6NUK4 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
REEP3Q6NUK4 AC036111.1-201ENST00000533973 1582 ntBASIC17.11■□□□□ 0.33
REEP3Q6NUK4 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
REEP3Q6NUK4 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
REEP3Q6NUK4 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
REEP3Q6NUK4 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
REEP3Q6NUK4 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
REEP3Q6NUK4 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC17.1■□□□□ 0.33
REEP3Q6NUK4 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC17.1■□□□□ 0.33
REEP3Q6NUK4 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
REEP3Q6NUK4 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
REEP3Q6NUK4 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
REEP3Q6NUK4 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC17.1■□□□□ 0.33
REEP3Q6NUK4 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC17.1■□□□□ 0.33
REEP3Q6NUK4 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
REEP3Q6NUK4 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
REEP3Q6NUK4 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
REEP3Q6NUK4 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
REEP3Q6NUK4 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC17.1■□□□□ 0.33
REEP3Q6NUK4 MIR149-201ENST00000384879 89 ntBASIC17.1■□□□□ 0.33
REEP3Q6NUK4 AL158047.1-201ENST00000445918 881 ntBASIC17.1■□□□□ 0.33
REEP3Q6NUK4 PENK-204ENST00000518770 863 ntTSL 2 BASIC17.1■□□□□ 0.33
REEP3Q6NUK4 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
REEP3Q6NUK4 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC17.1■□□□□ 0.33
REEP3Q6NUK4 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC17.1■□□□□ 0.33
REEP3Q6NUK4 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC17.1■□□□□ 0.33
REEP3Q6NUK4 MIR4674-201ENST00000582457 87 ntBASIC17.1■□□□□ 0.33
REEP3Q6NUK4 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms