Protein–RNA interactions for Protein: Q5VTL8

PRPF38B, Pre-mRNA-splicing factor 38B, humanhuman

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38BQ5VTL8 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
PRPF38BQ5VTL8 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PRPF38BQ5VTL8 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PRPF38BQ5VTL8 NEK7-201ENST00000367383 586 ntTSL 2 BASIC19.8■□□□□ 0.76
PRPF38BQ5VTL8 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC19.8■□□□□ 0.76
PRPF38BQ5VTL8 NABP1-203ENST00000409510 843 ntTSL 5 BASIC19.8■□□□□ 0.76
PRPF38BQ5VTL8 U91328.1-201ENST00000437528 223 ntBASIC19.8■□□□□ 0.76
PRPF38BQ5VTL8 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC19.8■□□□□ 0.76
PRPF38BQ5VTL8 CNN2P2-201ENST00000443536 909 ntBASIC19.8■□□□□ 0.76
PRPF38BQ5VTL8 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC19.8■□□□□ 0.76
PRPF38BQ5VTL8 CNN2P3-201ENST00000450201 906 ntBASIC19.8■□□□□ 0.76
PRPF38BQ5VTL8 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC19.8■□□□□ 0.76
PRPF38BQ5VTL8 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC19.8■□□□□ 0.76
PRPF38BQ5VTL8 SMN2-210ENST00000511812 867 ntTSL 2 BASIC19.8■□□□□ 0.76
PRPF38BQ5VTL8 CD63-210ENST00000550776 870 ntTSL 5 BASIC19.8■□□□□ 0.76
PRPF38BQ5VTL8 COX5A-202ENST00000562233 441 ntTSL 3 BASIC19.8■□□□□ 0.76
PRPF38BQ5VTL8 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC19.8■□□□□ 0.76
PRPF38BQ5VTL8 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
PRPF38BQ5VTL8 AL136317.3-201ENST00000618497 906 ntBASIC19.8■□□□□ 0.76
PRPF38BQ5VTL8 RETN-203ENST00000629642 400 ntTSL 5 BASIC19.8■□□□□ 0.76
PRPF38BQ5VTL8 AL022326.1-202ENST00000641533 845 ntBASIC19.8■□□□□ 0.76
PRPF38BQ5VTL8 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC19.8■□□□□ 0.76
PRPF38BQ5VTL8 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
PRPF38BQ5VTL8 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC19.8■□□□□ 0.76
PRPF38BQ5VTL8 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PRPF38BQ5VTL8 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC19.79■□□□□ 0.76
PRPF38BQ5VTL8 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
PRPF38BQ5VTL8 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PRPF38BQ5VTL8 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PRPF38BQ5VTL8 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PRPF38BQ5VTL8 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PRPF38BQ5VTL8 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PRPF38BQ5VTL8 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
PRPF38BQ5VTL8 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
PRPF38BQ5VTL8 AC003669.1-201ENST00000334569 611 ntBASIC19.79■□□□□ 0.76
PRPF38BQ5VTL8 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PRPF38BQ5VTL8 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC19.79■□□□□ 0.76
PRPF38BQ5VTL8 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PRPF38BQ5VTL8 RPS2P32-201ENST00000439199 892 ntBASIC19.79■□□□□ 0.76
PRPF38BQ5VTL8 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PRPF38BQ5VTL8 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC19.79■□□□□ 0.76
PRPF38BQ5VTL8 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC19.79■□□□□ 0.76
PRPF38BQ5VTL8 AC022145.2-201ENST00000598203 171 ntBASIC19.79■□□□□ 0.76
PRPF38BQ5VTL8 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PRPF38BQ5VTL8 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC19.79■□□□□ 0.76
PRPF38BQ5VTL8 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC19.79■□□□□ 0.76
PRPF38BQ5VTL8 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PRPF38BQ5VTL8 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
PRPF38BQ5VTL8 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC19.79■□□□□ 0.76
PRPF38BQ5VTL8 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC19.79■□□□□ 0.76
PRPF38BQ5VTL8 CYP51A1P2-201ENST00000419457 1499 ntBASIC19.79■□□□□ 0.76
PRPF38BQ5VTL8 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PRPF38BQ5VTL8 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC19.78■□□□□ 0.76
PRPF38BQ5VTL8 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PRPF38BQ5VTL8 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
PRPF38BQ5VTL8 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PRPF38BQ5VTL8 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PRPF38BQ5VTL8 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
PRPF38BQ5VTL8 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC19.78■□□□□ 0.76
PRPF38BQ5VTL8 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PRPF38BQ5VTL8 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PRPF38BQ5VTL8 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC19.78■□□□□ 0.76
PRPF38BQ5VTL8 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC19.78■□□□□ 0.76
PRPF38BQ5VTL8 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PRPF38BQ5VTL8 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC19.78■□□□□ 0.76
PRPF38BQ5VTL8 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC19.78■□□□□ 0.76
PRPF38BQ5VTL8 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC19.78■□□□□ 0.76
PRPF38BQ5VTL8 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC19.78■□□□□ 0.76
PRPF38BQ5VTL8 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC19.78■□□□□ 0.76
PRPF38BQ5VTL8 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC19.78■□□□□ 0.76
PRPF38BQ5VTL8 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PRPF38BQ5VTL8 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC19.78■□□□□ 0.76
PRPF38BQ5VTL8 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PRPF38BQ5VTL8 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PRPF38BQ5VTL8 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PRPF38BQ5VTL8 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PRPF38BQ5VTL8 AC008556.1-201ENST00000610908 2040 ntBASIC19.78■□□□□ 0.76
PRPF38BQ5VTL8 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC19.78■□□□□ 0.76
PRPF38BQ5VTL8 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PRPF38BQ5VTL8 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PRPF38BQ5VTL8 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PRPF38BQ5VTL8 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PRPF38BQ5VTL8 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
PRPF38BQ5VTL8 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC19.77■□□□□ 0.76
PRPF38BQ5VTL8 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
PRPF38BQ5VTL8 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
PRPF38BQ5VTL8 ENSA-205ENST00000361532 792 ntTSL 2 BASIC19.77■□□□□ 0.76
PRPF38BQ5VTL8 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PRPF38BQ5VTL8 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PRPF38BQ5VTL8 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC19.77■□□□□ 0.76
PRPF38BQ5VTL8 MIR943-201ENST00000401286 94 ntBASIC19.77■□□□□ 0.76
PRPF38BQ5VTL8 CENPM-205ENST00000404067 905 ntTSL 3 BASIC19.77■□□□□ 0.76
PRPF38BQ5VTL8 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PRPF38BQ5VTL8 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC19.77■□□□□ 0.76
PRPF38BQ5VTL8 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
PRPF38BQ5VTL8 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC19.77■□□□□ 0.76
PRPF38BQ5VTL8 SPDYE22P-201ENST00000582158 798 ntBASIC19.77■□□□□ 0.76
PRPF38BQ5VTL8 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
PRPF38BQ5VTL8 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
PRPF38BQ5VTL8 AL662799.1-202ENST00000614205 422 ntBASIC19.77■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms