Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC27.67■■■□□ 2.02
CDC42BPAQ5VT25 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
CDC42BPAQ5VT25 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC27.67■■■□□ 2.02
CDC42BPAQ5VT25 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC27.67■■■□□ 2.02
CDC42BPAQ5VT25 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
CDC42BPAQ5VT25 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
CDC42BPAQ5VT25 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC27.67■■■□□ 2.02
CDC42BPAQ5VT25 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC27.67■■■□□ 2.02
CDC42BPAQ5VT25 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC27.67■■■□□ 2.02
CDC42BPAQ5VT25 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC27.67■■■□□ 2.02
CDC42BPAQ5VT25 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC27.67■■■□□ 2.02
CDC42BPAQ5VT25 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC27.67■■■□□ 2.02
CDC42BPAQ5VT25 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC27.66■■■□□ 2.02
CDC42BPAQ5VT25 COBL-210ENST00000632460 1941 ntTSL 5 BASIC27.66■■■□□ 2.02
CDC42BPAQ5VT25 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC27.66■■■□□ 2.02
CDC42BPAQ5VT25 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC27.66■■■□□ 2.02
CDC42BPAQ5VT25 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC27.66■■■□□ 2.02
CDC42BPAQ5VT25 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
CDC42BPAQ5VT25 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC27.66■■■□□ 2.02
CDC42BPAQ5VT25 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
CDC42BPAQ5VT25 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
CDC42BPAQ5VT25 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC27.66■■■□□ 2.02
CDC42BPAQ5VT25 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC27.66■■■□□ 2.02
CDC42BPAQ5VT25 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC27.66■■■□□ 2.02
CDC42BPAQ5VT25 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC27.65■■■□□ 2.02
CDC42BPAQ5VT25 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC27.65■■■□□ 2.02
CDC42BPAQ5VT25 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC27.65■■■□□ 2.02
CDC42BPAQ5VT25 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC27.65■■■□□ 2.02
CDC42BPAQ5VT25 RPS29-206ENST00000557111 488 ntTSL 2 BASIC27.65■■■□□ 2.02
CDC42BPAQ5VT25 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC27.65■■■□□ 2.02
CDC42BPAQ5VT25 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC27.65■■■□□ 2.02
CDC42BPAQ5VT25 FAM197Y3-203ENST00000618346 717 ntBASIC27.65■■■□□ 2.02
CDC42BPAQ5VT25 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC27.65■■■□□ 2.02
CDC42BPAQ5VT25 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
CDC42BPAQ5VT25 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
CDC42BPAQ5VT25 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.02
CDC42BPAQ5VT25 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC27.64■■■□□ 2.02
CDC42BPAQ5VT25 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC27.64■■■□□ 2.02
CDC42BPAQ5VT25 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC27.64■■■□□ 2.02
CDC42BPAQ5VT25 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC27.64■■■□□ 2.02
CDC42BPAQ5VT25 AC092910.1-201ENST00000482027 1129 ntBASIC27.64■■■□□ 2.02
CDC42BPAQ5VT25 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC27.64■■■□□ 2.02
CDC42BPAQ5VT25 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC27.64■■■□□ 2.02
CDC42BPAQ5VT25 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC27.64■■■□□ 2.02
CDC42BPAQ5VT25 AC104109.2-201ENST00000602919 1418 ntBASIC27.64■■■□□ 2.02
CDC42BPAQ5VT25 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC27.64■■■□□ 2.02
CDC42BPAQ5VT25 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC27.64■■■□□ 2.02
CDC42BPAQ5VT25 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.02
CDC42BPAQ5VT25 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.02
CDC42BPAQ5VT25 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC27.64■■■□□ 2.02
CDC42BPAQ5VT25 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC27.64■■■□□ 2.02
CDC42BPAQ5VT25 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC27.64■■■□□ 2.01
CDC42BPAQ5VT25 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC27.64■■■□□ 2.01
CDC42BPAQ5VT25 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC27.64■■■□□ 2.01
CDC42BPAQ5VT25 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC27.64■■■□□ 2.01
CDC42BPAQ5VT25 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC27.64■■■□□ 2.01
CDC42BPAQ5VT25 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC27.64■■■□□ 2.01
CDC42BPAQ5VT25 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC27.64■■■□□ 2.01
CDC42BPAQ5VT25 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC27.64■■■□□ 2.01
CDC42BPAQ5VT25 KRT8P47-201ENST00000604727 1398 ntBASIC27.63■■■□□ 2.01
CDC42BPAQ5VT25 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC27.63■■■□□ 2.01
CDC42BPAQ5VT25 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC27.63■■■□□ 2.01
CDC42BPAQ5VT25 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC27.63■■■□□ 2.01
CDC42BPAQ5VT25 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC27.63■■■□□ 2.01
CDC42BPAQ5VT25 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC27.63■■■□□ 2.01
CDC42BPAQ5VT25 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
CDC42BPAQ5VT25 AL356309.3-201ENST00000624132 1934 ntBASIC27.63■■■□□ 2.01
CDC42BPAQ5VT25 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC27.63■■■□□ 2.01
CDC42BPAQ5VT25 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC27.63■■■□□ 2.01
CDC42BPAQ5VT25 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC27.63■■■□□ 2.01
CDC42BPAQ5VT25 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
CDC42BPAQ5VT25 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC27.63■■■□□ 2.01
CDC42BPAQ5VT25 RNA5SP415-201ENST00000517246 115 ntBASIC27.63■■■□□ 2.01
CDC42BPAQ5VT25 RNF151-202ENST00000569210 853 ntTSL 2 BASIC27.63■■■□□ 2.01
CDC42BPAQ5VT25 MTDHP4-201ENST00000600287 670 ntBASIC27.63■■■□□ 2.01
CDC42BPAQ5VT25 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC27.63■■■□□ 2.01
CDC42BPAQ5VT25 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC27.63■■■□□ 2.01
CDC42BPAQ5VT25 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC27.63■■■□□ 2.01
CDC42BPAQ5VT25 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC27.63■■■□□ 2.01
CDC42BPAQ5VT25 ZNF259P1-201ENST00000407656 1365 ntBASIC27.63■■■□□ 2.01
CDC42BPAQ5VT25 ANO7L1-203ENST00000602586 1720 ntBASIC27.63■■■□□ 2.01
CDC42BPAQ5VT25 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC27.63■■■□□ 2.01
CDC42BPAQ5VT25 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
CDC42BPAQ5VT25 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC27.63■■■□□ 2.01
CDC42BPAQ5VT25 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC27.62■■■□□ 2.01
CDC42BPAQ5VT25 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC27.62■■■□□ 2.01
CDC42BPAQ5VT25 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
CDC42BPAQ5VT25 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC27.62■■■□□ 2.01
CDC42BPAQ5VT25 LINC00602-201ENST00000629776 2065 ntBASIC27.62■■■□□ 2.01
CDC42BPAQ5VT25 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC27.62■■■□□ 2.01
CDC42BPAQ5VT25 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC27.62■■■□□ 2.01
CDC42BPAQ5VT25 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC27.62■■■□□ 2.01
CDC42BPAQ5VT25 AC007967.3-201ENST00000434308 558 ntBASIC27.62■■■□□ 2.01
CDC42BPAQ5VT25 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC27.62■■■□□ 2.01
CDC42BPAQ5VT25 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC27.62■■■□□ 2.01
CDC42BPAQ5VT25 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC27.62■■■□□ 2.01
CDC42BPAQ5VT25 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC27.62■■■□□ 2.01
CDC42BPAQ5VT25 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
CDC42BPAQ5VT25 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
CDC42BPAQ5VT25 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC27.62■■■□□ 2.01
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms