Protein–RNA interactions for Protein: Q5SXM2

SNAPC4, snRNA-activating protein complex subunit 4, humanhuman

Predictions only

Length 1,469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4Q5SXM2 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC29.85■■■□□ 2.37
SNAPC4Q5SXM2 AC009102.3-201ENST00000623118 1491 ntBASIC29.85■■■□□ 2.37
SNAPC4Q5SXM2 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC29.85■■■□□ 2.37
SNAPC4Q5SXM2 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC29.85■■■□□ 2.37
SNAPC4Q5SXM2 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
SNAPC4Q5SXM2 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC29.85■■■□□ 2.37
SNAPC4Q5SXM2 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC29.85■■■□□ 2.37
SNAPC4Q5SXM2 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
SNAPC4Q5SXM2 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC29.85■■■□□ 2.37
SNAPC4Q5SXM2 ASL-204ENST00000395331 1538 ntTSL 5 BASIC29.85■■■□□ 2.37
SNAPC4Q5SXM2 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC29.85■■■□□ 2.37
SNAPC4Q5SXM2 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC29.85■■■□□ 2.37
SNAPC4Q5SXM2 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC29.85■■■□□ 2.37
SNAPC4Q5SXM2 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
SNAPC4Q5SXM2 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC29.84■■■□□ 2.37
SNAPC4Q5SXM2 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC29.84■■■□□ 2.37
SNAPC4Q5SXM2 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC29.84■■■□□ 2.37
SNAPC4Q5SXM2 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
SNAPC4Q5SXM2 BCRP1-201ENST00000444246 691 ntBASIC29.84■■■□□ 2.37
SNAPC4Q5SXM2 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC29.84■■■□□ 2.37
SNAPC4Q5SXM2 C20orf181-201ENST00000623918 480 ntBASIC29.84■■■□□ 2.37
SNAPC4Q5SXM2 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC29.84■■■□□ 2.37
SNAPC4Q5SXM2 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
SNAPC4Q5SXM2 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
SNAPC4Q5SXM2 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC29.83■■■□□ 2.37
SNAPC4Q5SXM2 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
SNAPC4Q5SXM2 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC29.83■■■□□ 2.37
SNAPC4Q5SXM2 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC29.83■■■□□ 2.37
SNAPC4Q5SXM2 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC29.83■■■□□ 2.37
SNAPC4Q5SXM2 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC29.83■■■□□ 2.37
SNAPC4Q5SXM2 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC29.83■■■□□ 2.37
SNAPC4Q5SXM2 AC006557.2-201ENST00000592985 1240 ntBASIC29.83■■■□□ 2.37
SNAPC4Q5SXM2 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC29.83■■■□□ 2.37
SNAPC4Q5SXM2 AC073592.4-201ENST00000623827 446 ntBASIC29.83■■■□□ 2.37
SNAPC4Q5SXM2 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC29.83■■■□□ 2.37
SNAPC4Q5SXM2 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC29.83■■■□□ 2.37
SNAPC4Q5SXM2 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
SNAPC4Q5SXM2 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
SNAPC4Q5SXM2 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
SNAPC4Q5SXM2 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC29.83■■■□□ 2.37
SNAPC4Q5SXM2 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
SNAPC4Q5SXM2 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
SNAPC4Q5SXM2 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC29.82■■■□□ 2.36
SNAPC4Q5SXM2 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC29.82■■■□□ 2.36
SNAPC4Q5SXM2 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC29.82■■■□□ 2.36
SNAPC4Q5SXM2 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC29.82■■■□□ 2.36
SNAPC4Q5SXM2 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC29.82■■■□□ 2.36
SNAPC4Q5SXM2 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC29.82■■■□□ 2.36
SNAPC4Q5SXM2 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC29.82■■■□□ 2.36
SNAPC4Q5SXM2 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC29.82■■■□□ 2.36
SNAPC4Q5SXM2 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
SNAPC4Q5SXM2 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC29.82■■■□□ 2.36
SNAPC4Q5SXM2 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC29.82■■■□□ 2.36
SNAPC4Q5SXM2 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC29.82■■■□□ 2.36
SNAPC4Q5SXM2 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC29.82■■■□□ 2.36
SNAPC4Q5SXM2 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC29.82■■■□□ 2.36
SNAPC4Q5SXM2 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
SNAPC4Q5SXM2 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC29.82■■■□□ 2.36
SNAPC4Q5SXM2 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC29.82■■■□□ 2.36
SNAPC4Q5SXM2 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC29.82■■■□□ 2.36
SNAPC4Q5SXM2 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC29.81■■■□□ 2.36
SNAPC4Q5SXM2 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC29.81■■■□□ 2.36
SNAPC4Q5SXM2 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC29.81■■■□□ 2.36
SNAPC4Q5SXM2 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC29.81■■■□□ 2.36
SNAPC4Q5SXM2 AC136632.2-201ENST00000512891 861 ntBASIC29.81■■■□□ 2.36
SNAPC4Q5SXM2 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC29.81■■■□□ 2.36
SNAPC4Q5SXM2 AL513190.1-201ENST00000621254 727 ntBASIC29.81■■■□□ 2.36
SNAPC4Q5SXM2 AC093028.1-201ENST00000622998 982 ntBASIC29.81■■■□□ 2.36
SNAPC4Q5SXM2 AC005593.1-201ENST00000624894 515 ntBASIC29.81■■■□□ 2.36
SNAPC4Q5SXM2 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC29.81■■■□□ 2.36
SNAPC4Q5SXM2 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
SNAPC4Q5SXM2 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
SNAPC4Q5SXM2 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
SNAPC4Q5SXM2 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC29.81■■■□□ 2.36
SNAPC4Q5SXM2 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC29.81■■■□□ 2.36
SNAPC4Q5SXM2 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC29.81■■■□□ 2.36
SNAPC4Q5SXM2 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC29.81■■■□□ 2.36
SNAPC4Q5SXM2 ELL2P1-201ENST00000413990 1906 ntBASIC29.81■■■□□ 2.36
SNAPC4Q5SXM2 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
SNAPC4Q5SXM2 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC29.8■■■□□ 2.36
SNAPC4Q5SXM2 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC29.8■■■□□ 2.36
SNAPC4Q5SXM2 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC29.8■■■□□ 2.36
SNAPC4Q5SXM2 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC29.8■■■□□ 2.36
SNAPC4Q5SXM2 HLA-J-203ENST00000494367 1087 ntBASIC29.8■■■□□ 2.36
SNAPC4Q5SXM2 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC29.8■■■□□ 2.36
SNAPC4Q5SXM2 RPL28-205ENST00000558131 444 ntTSL 5 BASIC29.8■■■□□ 2.36
SNAPC4Q5SXM2 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
SNAPC4Q5SXM2 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC29.8■■■□□ 2.36
SNAPC4Q5SXM2 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
SNAPC4Q5SXM2 AC112907.3-201ENST00000577781 2400 ntBASIC29.8■■■□□ 2.36
SNAPC4Q5SXM2 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC29.8■■■□□ 2.36
SNAPC4Q5SXM2 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC29.8■■■□□ 2.36
SNAPC4Q5SXM2 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC29.8■■■□□ 2.36
SNAPC4Q5SXM2 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC29.8■■■□□ 2.36
SNAPC4Q5SXM2 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC29.8■■■□□ 2.36
SNAPC4Q5SXM2 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC29.8■■■□□ 2.36
SNAPC4Q5SXM2 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC29.8■■■□□ 2.36
SNAPC4Q5SXM2 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC29.8■■■□□ 2.36
SNAPC4Q5SXM2 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC29.8■■■□□ 2.36
SNAPC4Q5SXM2 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC29.8■■■□□ 2.36
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms