Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
RSPO4Q2I0M5 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC17.72■□□□□ 0.43
RSPO4Q2I0M5 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RSPO4Q2I0M5 PRSS29P-201ENST00000440800 595 ntBASIC17.72■□□□□ 0.43
RSPO4Q2I0M5 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC17.72■□□□□ 0.43
RSPO4Q2I0M5 CEND1P1-201ENST00000451006 455 ntBASIC17.72■□□□□ 0.43
RSPO4Q2I0M5 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC17.72■□□□□ 0.43
RSPO4Q2I0M5 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC17.72■□□□□ 0.43
RSPO4Q2I0M5 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC17.72■□□□□ 0.43
RSPO4Q2I0M5 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC17.72■□□□□ 0.43
RSPO4Q2I0M5 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RSPO4Q2I0M5 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC17.72■□□□□ 0.43
RSPO4Q2I0M5 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RSPO4Q2I0M5 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
RSPO4Q2I0M5 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
RSPO4Q2I0M5 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RSPO4Q2I0M5 MED17-221ENST00000639724 2317 ntTSL 5 BASIC17.72■□□□□ 0.43
RSPO4Q2I0M5 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RSPO4Q2I0M5 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC17.72■□□□□ 0.43
RSPO4Q2I0M5 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RSPO4Q2I0M5 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
RSPO4Q2I0M5 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC17.72■□□□□ 0.43
RSPO4Q2I0M5 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RSPO4Q2I0M5 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC17.72■□□□□ 0.43
RSPO4Q2I0M5 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RSPO4Q2I0M5 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
RSPO4Q2I0M5 AL512353.2-201ENST00000448759 1962 ntBASIC17.71■□□□□ 0.43
RSPO4Q2I0M5 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RSPO4Q2I0M5 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RSPO4Q2I0M5 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
RSPO4Q2I0M5 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RSPO4Q2I0M5 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RSPO4Q2I0M5 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RSPO4Q2I0M5 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RSPO4Q2I0M5 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RSPO4Q2I0M5 TSEN15P1-201ENST00000423257 515 ntBASIC17.71■□□□□ 0.43
RSPO4Q2I0M5 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RSPO4Q2I0M5 AC007274.1-201ENST00000439805 662 ntBASIC17.71■□□□□ 0.43
RSPO4Q2I0M5 MEG3-211ENST00000452514 461 ntTSL 3 BASIC17.71■□□□□ 0.43
RSPO4Q2I0M5 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC17.71■□□□□ 0.43
RSPO4Q2I0M5 MSRA-206ENST00000521209 814 ntTSL 3 BASIC17.71■□□□□ 0.43
RSPO4Q2I0M5 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC17.71■□□□□ 0.43
RSPO4Q2I0M5 NKAPP1-205ENST00000585790 367 ntBASIC17.71■□□□□ 0.43
RSPO4Q2I0M5 AC027612.4-201ENST00000605371 583 ntBASIC17.71■□□□□ 0.43
RSPO4Q2I0M5 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC17.71■□□□□ 0.43
RSPO4Q2I0M5 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
RSPO4Q2I0M5 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RSPO4Q2I0M5 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RSPO4Q2I0M5 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
RSPO4Q2I0M5 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
RSPO4Q2I0M5 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC17.71■□□□□ 0.43
RSPO4Q2I0M5 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC17.71■□□□□ 0.42
RSPO4Q2I0M5 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.42
RSPO4Q2I0M5 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RSPO4Q2I0M5 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
RSPO4Q2I0M5 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC17.7■□□□□ 0.42
RSPO4Q2I0M5 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RSPO4Q2I0M5 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC17.7■□□□□ 0.42
RSPO4Q2I0M5 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
RSPO4Q2I0M5 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC17.7■□□□□ 0.42
RSPO4Q2I0M5 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RSPO4Q2I0M5 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC17.7■□□□□ 0.42
RSPO4Q2I0M5 GABARAPL3-202ENST00000624044 1851 ntBASIC17.7■□□□□ 0.42
RSPO4Q2I0M5 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RSPO4Q2I0M5 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC17.7■□□□□ 0.42
RSPO4Q2I0M5 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC17.7■□□□□ 0.42
RSPO4Q2I0M5 METTL26-204ENST00000397665 558 ntTSL 2 BASIC17.7■□□□□ 0.42
RSPO4Q2I0M5 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC17.7■□□□□ 0.42
RSPO4Q2I0M5 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC17.7■□□□□ 0.42
RSPO4Q2I0M5 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC17.7■□□□□ 0.42
RSPO4Q2I0M5 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
RSPO4Q2I0M5 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC17.7■□□□□ 0.42
RSPO4Q2I0M5 AL078644.1-201ENST00000609881 752 ntBASIC17.7■□□□□ 0.42
RSPO4Q2I0M5 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC17.7■□□□□ 0.42
RSPO4Q2I0M5 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RSPO4Q2I0M5 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RSPO4Q2I0M5 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RSPO4Q2I0M5 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RSPO4Q2I0M5 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RSPO4Q2I0M5 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
RSPO4Q2I0M5 ELL2P1-201ENST00000413990 1906 ntBASIC17.7■□□□□ 0.42
RSPO4Q2I0M5 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RSPO4Q2I0M5 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC17.7■□□□□ 0.42
RSPO4Q2I0M5 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
RSPO4Q2I0M5 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RSPO4Q2I0M5 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
RSPO4Q2I0M5 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RSPO4Q2I0M5 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RSPO4Q2I0M5 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RSPO4Q2I0M5 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RSPO4Q2I0M5 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC17.7■□□□□ 0.42
RSPO4Q2I0M5 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
RSPO4Q2I0M5 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC17.69■□□□□ 0.42
RSPO4Q2I0M5 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RSPO4Q2I0M5 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RSPO4Q2I0M5 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
RSPO4Q2I0M5 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RSPO4Q2I0M5 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC17.69■□□□□ 0.42
RSPO4Q2I0M5 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
RSPO4Q2I0M5 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms