Protein–RNA interactions for Protein: P68366

TUBA4A, Tubulin alpha-4A chain, humanhuman

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA4AP68366 F2R-202ENST00000505600 442 ntTSL 2 BASIC17.23■□□□□ 0.35
TUBA4AP68366 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC17.23■□□□□ 0.35
TUBA4AP68366 RNF121-214ENST00000533380 870 ntTSL 3 BASIC17.23■□□□□ 0.35
TUBA4AP68366 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC17.23■□□□□ 0.35
TUBA4AP68366 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC17.23■□□□□ 0.35
TUBA4AP68366 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
TUBA4AP68366 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
TUBA4AP68366 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TUBA4AP68366 AC022211.2-201ENST00000585075 2527 ntBASIC17.23■□□□□ 0.35
TUBA4AP68366 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
TUBA4AP68366 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC17.23■□□□□ 0.35
TUBA4AP68366 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
TUBA4AP68366 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TUBA4AP68366 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
TUBA4AP68366 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
TUBA4AP68366 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC17.23■□□□□ 0.35
TUBA4AP68366 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC17.23■□□□□ 0.35
TUBA4AP68366 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TUBA4AP68366 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TUBA4AP68366 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC17.23■□□□□ 0.35
TUBA4AP68366 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TUBA4AP68366 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC17.22■□□□□ 0.35
TUBA4AP68366 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TUBA4AP68366 ANKRD18DP-204ENST00000455355 1975 ntBASIC17.22■□□□□ 0.35
TUBA4AP68366 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TUBA4AP68366 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TUBA4AP68366 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
TUBA4AP68366 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
TUBA4AP68366 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
TUBA4AP68366 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
TUBA4AP68366 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TUBA4AP68366 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC17.22■□□□□ 0.35
TUBA4AP68366 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
TUBA4AP68366 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TUBA4AP68366 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC17.22■□□□□ 0.35
TUBA4AP68366 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC17.22■□□□□ 0.35
TUBA4AP68366 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC17.22■□□□□ 0.35
TUBA4AP68366 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC17.22■□□□□ 0.35
TUBA4AP68366 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC17.22■□□□□ 0.35
TUBA4AP68366 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC17.22■□□□□ 0.35
TUBA4AP68366 MAX-217ENST00000557277 728 ntTSL 3 BASIC17.22■□□□□ 0.35
TUBA4AP68366 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC17.22■□□□□ 0.35
TUBA4AP68366 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
TUBA4AP68366 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TUBA4AP68366 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC17.22■□□□□ 0.35
TUBA4AP68366 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
TUBA4AP68366 NBPF21P-201ENST00000425093 1451 ntBASIC17.22■□□□□ 0.35
TUBA4AP68366 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TUBA4AP68366 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TUBA4AP68366 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
TUBA4AP68366 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TUBA4AP68366 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
TUBA4AP68366 AC093677.2-201ENST00000600169 1863 ntBASIC17.22■□□□□ 0.35
TUBA4AP68366 SNAI3-AS1-205ENST00000568633 2096 ntBASIC17.22■□□□□ 0.35
TUBA4AP68366 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TUBA4AP68366 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
TUBA4AP68366 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
TUBA4AP68366 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TUBA4AP68366 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
TUBA4AP68366 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC17.21■□□□□ 0.35
TUBA4AP68366 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
TUBA4AP68366 AP006587.1-201ENST00000534129 1502 ntBASIC17.21■□□□□ 0.35
TUBA4AP68366 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
TUBA4AP68366 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TUBA4AP68366 AL121761.2-201ENST00000598007 1648 ntBASIC17.21■□□□□ 0.35
TUBA4AP68366 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
TUBA4AP68366 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TUBA4AP68366 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TUBA4AP68366 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
TUBA4AP68366 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC17.21■□□□□ 0.35
TUBA4AP68366 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC17.21■□□□□ 0.35
TUBA4AP68366 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
TUBA4AP68366 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TUBA4AP68366 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
TUBA4AP68366 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
TUBA4AP68366 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
TUBA4AP68366 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TUBA4AP68366 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TUBA4AP68366 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TUBA4AP68366 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC17.21■□□□□ 0.35
TUBA4AP68366 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TUBA4AP68366 FLYWCH1P1-201ENST00000460917 1874 ntBASIC17.21■□□□□ 0.35
TUBA4AP68366 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC17.21■□□□□ 0.35
TUBA4AP68366 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TUBA4AP68366 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TUBA4AP68366 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
TUBA4AP68366 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
TUBA4AP68366 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
TUBA4AP68366 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC17.21■□□□□ 0.35
TUBA4AP68366 RHOD-202ENST00000532559 538 ntTSL 3 BASIC17.21■□□□□ 0.35
TUBA4AP68366 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC17.21■□□□□ 0.35
TUBA4AP68366 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TUBA4AP68366 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
TUBA4AP68366 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TUBA4AP68366 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC17.21■□□□□ 0.35
TUBA4AP68366 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC17.21■□□□□ 0.35
TUBA4AP68366 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TUBA4AP68366 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC17.21■□□□□ 0.35
TUBA4AP68366 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TUBA4AP68366 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms