Protein–RNA interactions for Protein: P57739

CLDN2, Claudin-2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2P57739 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
CLDN2P57739 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLDN2P57739 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLDN2P57739 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLDN2P57739 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CLDN2P57739 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CLDN2P57739 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CLDN2P57739 IGHV3-47-201ENST00000425060 335 ntBASIC18.08■□□□□ 0.48
CLDN2P57739 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC18.08■□□□□ 0.48
CLDN2P57739 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC18.08■□□□□ 0.48
CLDN2P57739 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CLDN2P57739 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC18.08■□□□□ 0.48
CLDN2P57739 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC18.08■□□□□ 0.48
CLDN2P57739 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CLDN2P57739 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CLDN2P57739 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CLDN2P57739 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC18.08■□□□□ 0.48
CLDN2P57739 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC18.08■□□□□ 0.48
CLDN2P57739 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC18.08■□□□□ 0.48
CLDN2P57739 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CLDN2P57739 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC18.08■□□□□ 0.48
CLDN2P57739 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CLDN2P57739 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
CLDN2P57739 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
CLDN2P57739 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC18.07■□□□□ 0.48
CLDN2P57739 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.48
CLDN2P57739 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CLDN2P57739 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CLDN2P57739 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
CLDN2P57739 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CLDN2P57739 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CLDN2P57739 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC18.07■□□□□ 0.48
CLDN2P57739 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
CLDN2P57739 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
CLDN2P57739 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CLDN2P57739 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC18.07■□□□□ 0.48
CLDN2P57739 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC18.07■□□□□ 0.48
CLDN2P57739 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC18.07■□□□□ 0.48
CLDN2P57739 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CLDN2P57739 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
CLDN2P57739 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC18.07■□□□□ 0.48
CLDN2P57739 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CLDN2P57739 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CLDN2P57739 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC18.07■□□□□ 0.48
CLDN2P57739 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CLDN2P57739 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CLDN2P57739 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CLDN2P57739 NARF-204ENST00000390006 1766 ntTSL 2 BASIC18.07■□□□□ 0.48
CLDN2P57739 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
CLDN2P57739 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC18.07■□□□□ 0.48
CLDN2P57739 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CLDN2P57739 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CLDN2P57739 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CLDN2P57739 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CLDN2P57739 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CLDN2P57739 AL024508.2-201ENST00000607749 1894 ntBASIC18.06■□□□□ 0.48
CLDN2P57739 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC18.06■□□□□ 0.48
CLDN2P57739 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
CLDN2P57739 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC18.06■□□□□ 0.48
CLDN2P57739 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CLDN2P57739 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC18.06■□□□□ 0.48
CLDN2P57739 BET1L-206ENST00000486280 665 ntTSL 3 BASIC18.06■□□□□ 0.48
CLDN2P57739 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CLDN2P57739 ABR-204ENST00000543210 1049 ntTSL 2 BASIC18.06■□□□□ 0.48
CLDN2P57739 ABR-217ENST00000572441 563 ntTSL 4 BASIC18.06■□□□□ 0.48
CLDN2P57739 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC18.06■□□□□ 0.48
CLDN2P57739 AC011840.4-201ENST00000578471 627 ntBASIC18.06■□□□□ 0.48
CLDN2P57739 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CLDN2P57739 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC18.06■□□□□ 0.48
CLDN2P57739 ASL-204ENST00000395331 1538 ntTSL 5 BASIC18.06■□□□□ 0.48
CLDN2P57739 NSUN5P1-202ENST00000421140 1535 ntBASIC18.06■□□□□ 0.48
CLDN2P57739 NSUN5P2-203ENST00000457352 1529 ntBASIC18.06■□□□□ 0.48
CLDN2P57739 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CLDN2P57739 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CLDN2P57739 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CLDN2P57739 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CLDN2P57739 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CLDN2P57739 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CLDN2P57739 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CLDN2P57739 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CLDN2P57739 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
CLDN2P57739 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CLDN2P57739 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC18.05■□□□□ 0.48
CLDN2P57739 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
CLDN2P57739 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CLDN2P57739 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC18.05■□□□□ 0.48
CLDN2P57739 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
CLDN2P57739 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
CLDN2P57739 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CLDN2P57739 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CLDN2P57739 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CLDN2P57739 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC18.05■□□□□ 0.48
CLDN2P57739 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC18.05■□□□□ 0.48
CLDN2P57739 FAAHP1-202ENST00000446499 1238 ntBASIC18.05■□□□□ 0.48
CLDN2P57739 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC18.05■□□□□ 0.48
CLDN2P57739 VENTXP7-201ENST00000475503 772 ntBASIC18.05■□□□□ 0.48
CLDN2P57739 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC18.05■□□□□ 0.48
CLDN2P57739 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC18.05■□□□□ 0.48
CLDN2P57739 LINC01711-201ENST00000598340 967 ntBASIC18.05■□□□□ 0.48
CLDN2P57739 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms