Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC20.2■□□□□ 0.82
PMS1P54277 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC20.2■□□□□ 0.82
PMS1P54277 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PMS1P54277 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC20.2■□□□□ 0.82
PMS1P54277 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC20.2■□□□□ 0.82
PMS1P54277 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
PMS1P54277 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PMS1P54277 KRT8P7-201ENST00000533003 1432 ntBASIC20.19■□□□□ 0.82
PMS1P54277 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
PMS1P54277 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PMS1P54277 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
PMS1P54277 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PMS1P54277 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PMS1P54277 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PMS1P54277 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC20.19■□□□□ 0.82
PMS1P54277 PHB2-202ENST00000440277 996 ntTSL 5 BASIC20.19■□□□□ 0.82
PMS1P54277 GXYLT1P6-201ENST00000456472 1187 ntBASIC20.19■□□□□ 0.82
PMS1P54277 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC20.19■□□□□ 0.82
PMS1P54277 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC20.19■□□□□ 0.82
PMS1P54277 AC104390.1-201ENST00000555663 520 ntBASIC20.19■□□□□ 0.82
PMS1P54277 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC20.19■□□□□ 0.82
PMS1P54277 NT5C-210ENST00000582160 860 ntTSL 2 BASIC20.19■□□□□ 0.82
PMS1P54277 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC20.19■□□□□ 0.82
PMS1P54277 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
PMS1P54277 AC112497.1-201ENST00000624824 639 ntBASIC20.19■□□□□ 0.82
PMS1P54277 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PMS1P54277 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PMS1P54277 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PMS1P54277 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PMS1P54277 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC20.19■□□□□ 0.82
PMS1P54277 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PMS1P54277 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PMS1P54277 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PMS1P54277 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PMS1P54277 STK4-201ENST00000372801 2038 ntTSL 2 BASIC20.19■□□□□ 0.82
PMS1P54277 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PMS1P54277 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC20.19■□□□□ 0.82
PMS1P54277 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PMS1P54277 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PMS1P54277 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
PMS1P54277 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
PMS1P54277 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC20.18■□□□□ 0.82
PMS1P54277 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC20.18■□□□□ 0.82
PMS1P54277 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
PMS1P54277 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PMS1P54277 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC20.18■□□□□ 0.82
PMS1P54277 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
PMS1P54277 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC20.18■□□□□ 0.82
PMS1P54277 ECEL1P2-202ENST00000465689 757 ntBASIC20.18■□□□□ 0.82
PMS1P54277 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC20.18■□□□□ 0.82
PMS1P54277 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC20.18■□□□□ 0.82
PMS1P54277 ETFA-216ENST00000560726 942 ntTSL 3 BASIC20.18■□□□□ 0.82
PMS1P54277 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC20.18■□□□□ 0.82
PMS1P54277 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PMS1P54277 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
PMS1P54277 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PMS1P54277 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
PMS1P54277 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PMS1P54277 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC20.18■□□□□ 0.82
PMS1P54277 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC20.18■□□□□ 0.82
PMS1P54277 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC20.18■□□□□ 0.82
PMS1P54277 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PMS1P54277 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PMS1P54277 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PMS1P54277 AL024508.2-201ENST00000607749 1894 ntBASIC20.18■□□□□ 0.82
PMS1P54277 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PMS1P54277 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PMS1P54277 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
PMS1P54277 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC20.17■□□□□ 0.82
PMS1P54277 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC20.17■□□□□ 0.82
PMS1P54277 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PMS1P54277 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC20.17■□□□□ 0.82
PMS1P54277 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
PMS1P54277 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PMS1P54277 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PMS1P54277 MMP23A-201ENST00000234610 1017 ntBASIC20.17■□□□□ 0.82
PMS1P54277 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
PMS1P54277 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC20.17■□□□□ 0.82
PMS1P54277 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PMS1P54277 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PMS1P54277 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC20.17■□□□□ 0.82
PMS1P54277 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC20.17■□□□□ 0.82
PMS1P54277 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC20.17■□□□□ 0.82
PMS1P54277 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC20.17■□□□□ 0.82
PMS1P54277 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PMS1P54277 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PMS1P54277 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PMS1P54277 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PMS1P54277 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PMS1P54277 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PMS1P54277 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PMS1P54277 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PMS1P54277 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
PMS1P54277 FLJ13224-201ENST00000313737 1514 ntBASIC20.17■□□□□ 0.82
PMS1P54277 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
PMS1P54277 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
PMS1P54277 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PMS1P54277 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PMS1P54277 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC20.16■□□□□ 0.82
PMS1P54277 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms