Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 WWC2-AS2-201ENST00000578387 2183 ntBASIC18.24■□□□□ 0.51
NUBP1P53384 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
NUBP1P53384 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NUBP1P53384 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NUBP1P53384 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC18.24■□□□□ 0.51
NUBP1P53384 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
NUBP1P53384 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NUBP1P53384 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC18.24■□□□□ 0.51
NUBP1P53384 KRT18P27-201ENST00000427733 1299 ntBASIC18.24■□□□□ 0.51
NUBP1P53384 PAICSP2-201ENST00000429118 1150 ntBASIC18.24■□□□□ 0.51
NUBP1P53384 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC18.24■□□□□ 0.51
NUBP1P53384 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC18.24■□□□□ 0.51
NUBP1P53384 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC18.24■□□□□ 0.51
NUBP1P53384 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC18.24■□□□□ 0.51
NUBP1P53384 AC108751.1-201ENST00000490852 363 ntBASIC18.24■□□□□ 0.51
NUBP1P53384 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC18.24■□□□□ 0.51
NUBP1P53384 RNF34-208ENST00000555076 593 ntTSL 3 BASIC18.24■□□□□ 0.51
NUBP1P53384 AC090515.5-201ENST00000560378 526 ntTSL 5 BASIC18.24■□□□□ 0.51
NUBP1P53384 AC138761.1-201ENST00000584393 385 ntBASIC18.24■□□□□ 0.51
NUBP1P53384 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC18.24■□□□□ 0.51
NUBP1P53384 METTL23-205ENST00000588302 925 ntTSL 5 BASIC18.24■□□□□ 0.51
NUBP1P53384 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NUBP1P53384 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC18.24■□□□□ 0.51
NUBP1P53384 MED29-202ENST00000594368 1471 ntTSL 2 BASIC18.24■□□□□ 0.51
NUBP1P53384 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
NUBP1P53384 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
NUBP1P53384 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NUBP1P53384 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
NUBP1P53384 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
NUBP1P53384 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
NUBP1P53384 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC18.23■□□□□ 0.51
NUBP1P53384 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
NUBP1P53384 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC18.23■□□□□ 0.51
NUBP1P53384 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
NUBP1P53384 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
NUBP1P53384 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NUBP1P53384 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
NUBP1P53384 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC18.23■□□□□ 0.51
NUBP1P53384 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
NUBP1P53384 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
NUBP1P53384 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
NUBP1P53384 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
NUBP1P53384 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NUBP1P53384 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NUBP1P53384 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
NUBP1P53384 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC18.23■□□□□ 0.51
NUBP1P53384 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NUBP1P53384 AC092905.1-201ENST00000467527 949 ntBASIC18.23■□□□□ 0.51
NUBP1P53384 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC18.23■□□□□ 0.51
NUBP1P53384 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC18.23■□□□□ 0.51
NUBP1P53384 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC18.23■□□□□ 0.51
NUBP1P53384 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC18.23■□□□□ 0.51
NUBP1P53384 AL031430.1-201ENST00000642067 1039 ntBASIC18.23■□□□□ 0.51
NUBP1P53384 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC18.23■□□□□ 0.51
NUBP1P53384 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NUBP1P53384 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC18.23■□□□□ 0.51
NUBP1P53384 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC18.22■□□□□ 0.51
NUBP1P53384 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
NUBP1P53384 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
NUBP1P53384 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
NUBP1P53384 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NUBP1P53384 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NUBP1P53384 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC18.22■□□□□ 0.51
NUBP1P53384 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC18.22■□□□□ 0.51
NUBP1P53384 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NUBP1P53384 GAPDHP74-202ENST00000632456 782 ntBASIC18.22■□□□□ 0.51
NUBP1P53384 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC18.22■□□□□ 0.51
NUBP1P53384 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NUBP1P53384 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NUBP1P53384 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC18.22■□□□□ 0.51
NUBP1P53384 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NUBP1P53384 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NUBP1P53384 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
NUBP1P53384 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
NUBP1P53384 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NUBP1P53384 AC097374.2-201ENST00000618617 1306 ntBASIC18.22■□□□□ 0.51
NUBP1P53384 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC18.21■□□□□ 0.51
NUBP1P53384 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
NUBP1P53384 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NUBP1P53384 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC18.21■□□□□ 0.51
NUBP1P53384 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
NUBP1P53384 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
NUBP1P53384 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC18.21■□□□□ 0.51
NUBP1P53384 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC18.21■□□□□ 0.51
NUBP1P53384 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
NUBP1P53384 AC092941.2-201ENST00000444379 1008 ntTSL 3 BASIC18.21■□□□□ 0.51
NUBP1P53384 ACTG1P14-201ENST00000446382 1122 ntBASIC18.21■□□□□ 0.51
NUBP1P53384 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC18.21■□□□□ 0.51
NUBP1P53384 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC18.21■□□□□ 0.51
NUBP1P53384 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC18.21■□□□□ 0.51
NUBP1P53384 RWDD4P1-201ENST00000488019 565 ntBASIC18.21■□□□□ 0.51
NUBP1P53384 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC18.21■□□□□ 0.51
NUBP1P53384 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC18.21■□□□□ 0.51
NUBP1P53384 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
NUBP1P53384 AC009154.2-201ENST00000621177 724 ntBASIC18.21■□□□□ 0.51
NUBP1P53384 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
NUBP1P53384 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC18.21■□□□□ 0.51
NUBP1P53384 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NUBP1P53384 MED17-221ENST00000639724 2317 ntTSL 5 BASIC18.21■□□□□ 0.51
NUBP1P53384 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms