Protein–RNA interactions for Protein: P48764

SLC9A3, Sodium/hydrogen exchanger 3, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC9A3P48764 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SLC9A3P48764 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
SLC9A3P48764 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SLC9A3P48764 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SLC9A3P48764 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC16.85■□□□□ 0.29
SLC9A3P48764 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SLC9A3P48764 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SLC9A3P48764 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SLC9A3P48764 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
SLC9A3P48764 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SLC9A3P48764 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC16.84■□□□□ 0.29
SLC9A3P48764 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SLC9A3P48764 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC16.84■□□□□ 0.29
SLC9A3P48764 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
SLC9A3P48764 AL356309.3-201ENST00000624132 1934 ntBASIC16.84■□□□□ 0.29
SLC9A3P48764 ESPNP-201ENST00000270691 2015 ntBASIC16.84■□□□□ 0.29
SLC9A3P48764 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC16.84■□□□□ 0.29
SLC9A3P48764 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SLC9A3P48764 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SLC9A3P48764 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
SLC9A3P48764 ENSA-205ENST00000361532 792 ntTSL 2 BASIC16.84■□□□□ 0.29
SLC9A3P48764 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC16.84■□□□□ 0.29
SLC9A3P48764 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC16.84■□□□□ 0.29
SLC9A3P48764 ITM2C-210ENST00000620962 501 ntBASIC16.84■□□□□ 0.29
SLC9A3P48764 SRI-203ENST00000419179 1307 ntTSL 2 BASIC16.84■□□□□ 0.29
SLC9A3P48764 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SLC9A3P48764 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC16.84■□□□□ 0.29
SLC9A3P48764 AC096733.2-201ENST00000609937 1394 ntBASIC16.84■□□□□ 0.29
SLC9A3P48764 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
SLC9A3P48764 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SLC9A3P48764 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SLC9A3P48764 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SLC9A3P48764 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC16.84■□□□□ 0.29
SLC9A3P48764 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC16.84■□□□□ 0.29
SLC9A3P48764 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
SLC9A3P48764 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC16.84■□□□□ 0.29
SLC9A3P48764 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SLC9A3P48764 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SLC9A3P48764 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SLC9A3P48764 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
SLC9A3P48764 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC16.84■□□□□ 0.29
SLC9A3P48764 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC16.84■□□□□ 0.29
SLC9A3P48764 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SLC9A3P48764 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
SLC9A3P48764 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
SLC9A3P48764 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
SLC9A3P48764 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC16.83■□□□□ 0.29
SLC9A3P48764 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SLC9A3P48764 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
SLC9A3P48764 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
SLC9A3P48764 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
SLC9A3P48764 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SLC9A3P48764 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SLC9A3P48764 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC16.83■□□□□ 0.28
SLC9A3P48764 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
SLC9A3P48764 MESTP1-201ENST00000404287 994 ntBASIC16.83■□□□□ 0.28
SLC9A3P48764 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
SLC9A3P48764 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC16.83■□□□□ 0.28
SLC9A3P48764 SAPCD2P4-201ENST00000424595 1171 ntBASIC16.83■□□□□ 0.28
SLC9A3P48764 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SLC9A3P48764 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC16.83■□□□□ 0.28
SLC9A3P48764 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC16.83■□□□□ 0.28
SLC9A3P48764 SPIB-206ENST00000596074 847 ntTSL 2 BASIC16.83■□□□□ 0.28
SLC9A3P48764 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
SLC9A3P48764 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SLC9A3P48764 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SLC9A3P48764 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SLC9A3P48764 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
SLC9A3P48764 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC16.82■□□□□ 0.28
SLC9A3P48764 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC16.82■□□□□ 0.28
SLC9A3P48764 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC16.82■□□□□ 0.28
SLC9A3P48764 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC16.82■□□□□ 0.28
SLC9A3P48764 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SLC9A3P48764 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC16.82■□□□□ 0.28
SLC9A3P48764 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SLC9A3P48764 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SLC9A3P48764 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SLC9A3P48764 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
SLC9A3P48764 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC16.82■□□□□ 0.28
SLC9A3P48764 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC16.82■□□□□ 0.28
SLC9A3P48764 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SLC9A3P48764 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
SLC9A3P48764 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SLC9A3P48764 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SLC9A3P48764 AP000593.1-201ENST00000393668 712 ntBASIC16.82■□□□□ 0.28
SLC9A3P48764 KRT18P29-201ENST00000397031 1267 ntBASIC16.82■□□□□ 0.28
SLC9A3P48764 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
SLC9A3P48764 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC16.82■□□□□ 0.28
SLC9A3P48764 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
SLC9A3P48764 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC16.82■□□□□ 0.28
SLC9A3P48764 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
SLC9A3P48764 CD177P1-201ENST00000606252 935 ntBASIC16.82■□□□□ 0.28
SLC9A3P48764 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC16.82■□□□□ 0.28
SLC9A3P48764 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
SLC9A3P48764 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SLC9A3P48764 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC16.82■□□□□ 0.28
SLC9A3P48764 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC16.82■□□□□ 0.28
SLC9A3P48764 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SLC9A3P48764 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC16.82■□□□□ 0.28
SLC9A3P48764 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms