Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
XPAP23025 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC18.52■□□□□ 0.56
XPAP23025 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC18.52■□□□□ 0.56
XPAP23025 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC18.52■□□□□ 0.56
XPAP23025 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC18.52■□□□□ 0.56
XPAP23025 AC079602.3-201ENST00000623931 403 ntBASIC18.52■□□□□ 0.56
XPAP23025 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
XPAP23025 AL163051.1-201ENST00000569214 1512 ntBASIC18.52■□□□□ 0.56
XPAP23025 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC18.52■□□□□ 0.55
XPAP23025 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC18.52■□□□□ 0.55
XPAP23025 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
XPAP23025 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
XPAP23025 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC18.52■□□□□ 0.55
XPAP23025 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.55
XPAP23025 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC18.52■□□□□ 0.55
XPAP23025 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.55
XPAP23025 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
XPAP23025 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
XPAP23025 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC18.51■□□□□ 0.55
XPAP23025 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC18.51■□□□□ 0.55
XPAP23025 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
XPAP23025 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
XPAP23025 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
XPAP23025 UPK3BP1-201ENST00000428678 509 ntBASIC18.51■□□□□ 0.55
XPAP23025 PVRIG2P-201ENST00000435460 978 ntBASIC18.51■□□□□ 0.55
XPAP23025 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC18.51■□□□□ 0.55
XPAP23025 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC18.51■□□□□ 0.55
XPAP23025 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC18.51■□□□□ 0.55
XPAP23025 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC18.51■□□□□ 0.55
XPAP23025 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
XPAP23025 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC18.51■□□□□ 0.55
XPAP23025 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
XPAP23025 ANO7L1-203ENST00000602586 1720 ntBASIC18.51■□□□□ 0.55
XPAP23025 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC18.51■□□□□ 0.55
XPAP23025 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC18.51■□□□□ 0.55
XPAP23025 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
XPAP23025 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC18.5■□□□□ 0.55
XPAP23025 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
XPAP23025 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
XPAP23025 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
XPAP23025 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
XPAP23025 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
XPAP23025 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
XPAP23025 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
XPAP23025 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC18.5■□□□□ 0.55
XPAP23025 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC18.5■□□□□ 0.55
XPAP23025 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
XPAP23025 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
XPAP23025 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC18.5■□□□□ 0.55
XPAP23025 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC18.5■□□□□ 0.55
XPAP23025 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC18.5■□□□□ 0.55
XPAP23025 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC18.5■□□□□ 0.55
XPAP23025 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
XPAP23025 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
XPAP23025 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC18.5■□□□□ 0.55
XPAP23025 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
XPAP23025 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
XPAP23025 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
XPAP23025 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
XPAP23025 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC18.49■□□□□ 0.55
XPAP23025 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
XPAP23025 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
XPAP23025 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
XPAP23025 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
XPAP23025 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
XPAP23025 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC18.49■□□□□ 0.55
XPAP23025 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
XPAP23025 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
XPAP23025 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
XPAP23025 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
XPAP23025 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
XPAP23025 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC18.49■□□□□ 0.55
XPAP23025 MIR149-201ENST00000384879 89 ntBASIC18.49■□□□□ 0.55
XPAP23025 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC18.49■□□□□ 0.55
XPAP23025 HLA-F-220ENST00000434407 884 ntBASIC18.49■□□□□ 0.55
XPAP23025 REEP1-209ENST00000541910 969 ntTSL 2 BASIC18.49■□□□□ 0.55
XPAP23025 NAA38-203ENST00000575071 553 ntTSL 2 BASIC18.49■□□□□ 0.55
XPAP23025 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC18.49■□□□□ 0.55
XPAP23025 AC009102.3-201ENST00000623118 1491 ntBASIC18.49■□□□□ 0.55
XPAP23025 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
XPAP23025 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
XPAP23025 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
XPAP23025 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
XPAP23025 AP000974.1-201ENST00000623909 2387 ntBASIC18.49■□□□□ 0.55
XPAP23025 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
XPAP23025 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
XPAP23025 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
XPAP23025 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
XPAP23025 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
XPAP23025 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
XPAP23025 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
XPAP23025 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
XPAP23025 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
XPAP23025 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC18.48■□□□□ 0.55
XPAP23025 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC18.48■□□□□ 0.55
XPAP23025 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
XPAP23025 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC18.48■□□□□ 0.55
XPAP23025 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC18.48■□□□□ 0.55
XPAP23025 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC18.48■□□□□ 0.55
XPAP23025 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms