Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CAPN3P20807 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC17.69■□□□□ 0.42
CAPN3P20807 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC17.69■□□□□ 0.42
CAPN3P20807 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC17.69■□□□□ 0.42
CAPN3P20807 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
CAPN3P20807 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CAPN3P20807 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CAPN3P20807 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CAPN3P20807 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC17.69■□□□□ 0.42
CAPN3P20807 FST-202ENST00000396947 2538 ntTSL 5 BASIC17.69■□□□□ 0.42
CAPN3P20807 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
CAPN3P20807 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CAPN3P20807 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CAPN3P20807 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
CAPN3P20807 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CAPN3P20807 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CAPN3P20807 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CAPN3P20807 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC17.68■□□□□ 0.42
CAPN3P20807 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CAPN3P20807 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CAPN3P20807 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CAPN3P20807 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CAPN3P20807 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
CAPN3P20807 MMP23A-201ENST00000234610 1017 ntBASIC17.68■□□□□ 0.42
CAPN3P20807 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CAPN3P20807 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
CAPN3P20807 NIFKP9-201ENST00000419265 221 ntBASIC17.68■□□□□ 0.42
CAPN3P20807 TSPY15P-201ENST00000457163 923 ntBASIC17.68■□□□□ 0.42
CAPN3P20807 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
CAPN3P20807 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CAPN3P20807 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC17.68■□□□□ 0.42
CAPN3P20807 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CAPN3P20807 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CAPN3P20807 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC17.68■□□□□ 0.42
CAPN3P20807 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC17.68■□□□□ 0.42
CAPN3P20807 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CAPN3P20807 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
CAPN3P20807 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
CAPN3P20807 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CAPN3P20807 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CAPN3P20807 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC17.68■□□□□ 0.42
CAPN3P20807 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
CAPN3P20807 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CAPN3P20807 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC17.67■□□□□ 0.42
CAPN3P20807 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CAPN3P20807 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC17.67■□□□□ 0.42
CAPN3P20807 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CAPN3P20807 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CAPN3P20807 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC17.67■□□□□ 0.42
CAPN3P20807 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CAPN3P20807 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC17.67■□□□□ 0.42
CAPN3P20807 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CAPN3P20807 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC17.67■□□□□ 0.42
CAPN3P20807 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
CAPN3P20807 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
CAPN3P20807 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
CAPN3P20807 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CAPN3P20807 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
CAPN3P20807 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CAPN3P20807 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CAPN3P20807 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC17.67■□□□□ 0.42
CAPN3P20807 KRT18P41-201ENST00000518924 1277 ntBASIC17.67■□□□□ 0.42
CAPN3P20807 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC17.67■□□□□ 0.42
CAPN3P20807 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC17.67■□□□□ 0.42
CAPN3P20807 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC17.67■□□□□ 0.42
CAPN3P20807 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC17.67■□□□□ 0.42
CAPN3P20807 ABBA01031674.1-201ENST00000635145 728 ntBASIC17.67■□□□□ 0.42
CAPN3P20807 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
CAPN3P20807 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CAPN3P20807 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
CAPN3P20807 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC17.67■□□□□ 0.42
CAPN3P20807 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CAPN3P20807 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
CAPN3P20807 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC17.67■□□□□ 0.42
CAPN3P20807 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CAPN3P20807 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC17.67■□□□□ 0.42
CAPN3P20807 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC17.67■□□□□ 0.42
CAPN3P20807 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CAPN3P20807 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
CAPN3P20807 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CAPN3P20807 FLJ13224-201ENST00000313737 1514 ntBASIC17.67■□□□□ 0.42
CAPN3P20807 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CAPN3P20807 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
CAPN3P20807 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CAPN3P20807 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.42
CAPN3P20807 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CAPN3P20807 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CAPN3P20807 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CAPN3P20807 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC17.66■□□□□ 0.42
CAPN3P20807 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CAPN3P20807 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CAPN3P20807 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CAPN3P20807 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC17.66■□□□□ 0.42
CAPN3P20807 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC17.66■□□□□ 0.42
CAPN3P20807 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC17.66■□□□□ 0.42
CAPN3P20807 PENK-204ENST00000518770 863 ntTSL 2 BASIC17.66■□□□□ 0.42
CAPN3P20807 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CAPN3P20807 CFL2-205ENST00000555765 632 ntTSL 2 BASIC17.66■□□□□ 0.42
CAPN3P20807 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
CAPN3P20807 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms