Protein–RNA interactions for Protein: P10826

RARB, Retinoic acid receptor beta, humanhuman

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARBP10826 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RARBP10826 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC20.51■□□□□ 0.87
RARBP10826 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RARBP10826 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RARBP10826 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC20.51■□□□□ 0.87
RARBP10826 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
RARBP10826 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
RARBP10826 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RARBP10826 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
RARBP10826 TP73-AS1-210ENST00000637775 1455 ntBASIC20.5■□□□□ 0.87
RARBP10826 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC20.5■□□□□ 0.87
RARBP10826 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC20.5■□□□□ 0.87
RARBP10826 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RARBP10826 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RARBP10826 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
RARBP10826 ZNF259P1-201ENST00000407656 1365 ntBASIC20.5■□□□□ 0.87
RARBP10826 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RARBP10826 AL158211.5-201ENST00000623583 2518 ntBASIC20.5■□□□□ 0.87
RARBP10826 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
RARBP10826 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
RARBP10826 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RARBP10826 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC20.5■□□□□ 0.87
RARBP10826 RBM17P3-201ENST00000417687 1192 ntBASIC20.5■□□□□ 0.87
RARBP10826 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC20.5■□□□□ 0.87
RARBP10826 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
RARBP10826 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC20.5■□□□□ 0.87
RARBP10826 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC20.5■□□□□ 0.87
RARBP10826 AL049840.3-201ENST00000602669 611 ntBASIC20.5■□□□□ 0.87
RARBP10826 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC20.5■□□□□ 0.87
RARBP10826 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
RARBP10826 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
RARBP10826 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC20.5■□□□□ 0.87
RARBP10826 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC20.5■□□□□ 0.87
RARBP10826 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RARBP10826 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RARBP10826 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
RARBP10826 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC20.5■□□□□ 0.87
RARBP10826 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
RARBP10826 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC20.49■□□□□ 0.87
RARBP10826 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
RARBP10826 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
RARBP10826 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RARBP10826 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
RARBP10826 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
RARBP10826 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC20.49■□□□□ 0.87
RARBP10826 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC20.49■□□□□ 0.87
RARBP10826 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
RARBP10826 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
RARBP10826 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC20.49■□□□□ 0.87
RARBP10826 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RARBP10826 MIR940-201ENST00000401276 94 ntBASIC20.49■□□□□ 0.87
RARBP10826 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC20.49■□□□□ 0.87
RARBP10826 FGFR3P6-201ENST00000457012 610 ntBASIC20.49■□□□□ 0.87
RARBP10826 SCARNA2-201ENST00000458748 420 ntBASIC20.49■□□□□ 0.87
RARBP10826 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC20.49■□□□□ 0.87
RARBP10826 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RARBP10826 RPL18-209ENST00000550645 463 ntTSL 5 BASIC20.49■□□□□ 0.87
RARBP10826 RPL18-214ENST00000552588 559 ntTSL 3 BASIC20.49■□□□□ 0.87
RARBP10826 MTDHP3-201ENST00000594186 672 ntBASIC20.49■□□□□ 0.87
RARBP10826 FAM215A-202ENST00000632077 792 ntBASIC20.49■□□□□ 0.87
RARBP10826 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RARBP10826 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC20.49■□□□□ 0.87
RARBP10826 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RARBP10826 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RARBP10826 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RARBP10826 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
RARBP10826 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RARBP10826 NFYC-AS1-201ENST00000606277 1687 ntBASIC20.48■□□□□ 0.87
RARBP10826 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RARBP10826 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RARBP10826 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC20.48■□□□□ 0.87
RARBP10826 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
RARBP10826 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC20.48■□□□□ 0.87
RARBP10826 AC112777.1-201ENST00000540175 1423 ntBASIC20.48■□□□□ 0.87
RARBP10826 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC20.48■□□□□ 0.87
RARBP10826 RPS2P28-201ENST00000314255 741 ntBASIC20.48■□□□□ 0.87
RARBP10826 MIR149-201ENST00000384879 89 ntBASIC20.48■□□□□ 0.87
RARBP10826 FABP5-202ENST00000396359 986 ntTSL 5 BASIC20.48■□□□□ 0.87
RARBP10826 BX842568.4-201ENST00000421222 227 ntBASIC20.48■□□□□ 0.87
RARBP10826 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC20.48■□□□□ 0.87
RARBP10826 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC20.48■□□□□ 0.87
RARBP10826 PIN1-206ENST00000587625 878 ntTSL 2 BASIC20.48■□□□□ 0.87
RARBP10826 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
RARBP10826 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC20.48■□□□□ 0.87
RARBP10826 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RARBP10826 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RARBP10826 BID-204ENST00000399767 2129 ntTSL 2 BASIC20.48■□□□□ 0.87
RARBP10826 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
RARBP10826 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RARBP10826 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
RARBP10826 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
RARBP10826 MTMR9LP-203ENST00000426597 1545 ntBASIC20.48■□□□□ 0.87
RARBP10826 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
RARBP10826 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RARBP10826 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
RARBP10826 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
RARBP10826 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
RARBP10826 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
RARBP10826 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
RARBP10826 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC20.47■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms