Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC14.35□□□□□ -0.11
CD28P10747 NUS1P1-201ENST00000446295 882 ntBASIC14.35□□□□□ -0.11
CD28P10747 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC14.35□□□□□ -0.11
CD28P10747 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC14.35□□□□□ -0.11
CD28P10747 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC14.35□□□□□ -0.11
CD28P10747 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC14.35□□□□□ -0.11
CD28P10747 KLK8-205ENST00000593490 267 ntTSL 3 BASIC14.35□□□□□ -0.11
CD28P10747 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC14.35□□□□□ -0.11
CD28P10747 AL732292.2-201ENST00000609649 430 ntBASIC14.35□□□□□ -0.11
CD28P10747 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
CD28P10747 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC14.35□□□□□ -0.11
CD28P10747 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CD28P10747 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC14.35□□□□□ -0.11
CD28P10747 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CD28P10747 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CD28P10747 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC14.35□□□□□ -0.11
CD28P10747 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CD28P10747 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CD28P10747 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
CD28P10747 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CD28P10747 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CD28P10747 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC14.35□□□□□ -0.11
CD28P10747 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC14.35□□□□□ -0.11
CD28P10747 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CD28P10747 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CD28P10747 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC14.34□□□□□ -0.11
CD28P10747 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CD28P10747 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CD28P10747 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
CD28P10747 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC14.34□□□□□ -0.11
CD28P10747 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
CD28P10747 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CD28P10747 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CD28P10747 HEIH-201ENST00000623091 1652 ntBASIC14.34□□□□□ -0.11
CD28P10747 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
CD28P10747 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CD28P10747 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CD28P10747 AC246785.2-201ENST00000432512 513 ntBASIC14.34□□□□□ -0.11
CD28P10747 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC14.34□□□□□ -0.11
CD28P10747 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC14.34□□□□□ -0.11
CD28P10747 FOSL1P1-201ENST00000511041 816 ntBASIC14.34□□□□□ -0.11
CD28P10747 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CD28P10747 REEP1-209ENST00000541910 969 ntTSL 2 BASIC14.34□□□□□ -0.11
CD28P10747 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC14.34□□□□□ -0.11
CD28P10747 AC090616.6-201ENST00000582640 721 ntBASIC14.34□□□□□ -0.11
CD28P10747 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
CD28P10747 GPR32P1-201ENST00000601788 811 ntBASIC14.34□□□□□ -0.11
CD28P10747 AC024563.2-201ENST00000603282 481 ntBASIC14.34□□□□□ -0.11
CD28P10747 IFNL4P1-201ENST00000607083 540 ntBASIC14.34□□□□□ -0.11
CD28P10747 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CD28P10747 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC14.34□□□□□ -0.11
CD28P10747 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC14.34□□□□□ -0.11
CD28P10747 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC14.34□□□□□ -0.11
CD28P10747 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
CD28P10747 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CD28P10747 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CD28P10747 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
CD28P10747 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CD28P10747 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CD28P10747 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
CD28P10747 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC14.34□□□□□ -0.11
CD28P10747 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
CD28P10747 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
CD28P10747 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC14.33□□□□□ -0.11
CD28P10747 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
CD28P10747 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CD28P10747 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
CD28P10747 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CD28P10747 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CD28P10747 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CD28P10747 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC14.33□□□□□ -0.12
CD28P10747 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CD28P10747 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CD28P10747 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CD28P10747 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CD28P10747 IGHGP-201ENST00000390555 1178 ntBASIC14.33□□□□□ -0.12
CD28P10747 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CD28P10747 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC14.33□□□□□ -0.12
CD28P10747 AC009065.1-201ENST00000564055 1225 ntBASIC14.33□□□□□ -0.12
CD28P10747 AC074051.2-201ENST00000565115 352 ntBASIC14.33□□□□□ -0.12
CD28P10747 AC012615.1-201ENST00000565797 1299 ntBASIC14.33□□□□□ -0.12
CD28P10747 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC14.33□□□□□ -0.12
CD28P10747 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC14.33□□□□□ -0.12
CD28P10747 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC14.33□□□□□ -0.12
CD28P10747 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CD28P10747 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CD28P10747 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC14.33□□□□□ -0.12
CD28P10747 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CD28P10747 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CD28P10747 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CD28P10747 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
CD28P10747 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
CD28P10747 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CD28P10747 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
CD28P10747 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CD28P10747 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
CD28P10747 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
CD28P10747 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC14.33□□□□□ -0.12
CD28P10747 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CD28P10747 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC14.33□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms