Protein–RNA interactions for Protein: P08123

COL1A2, Collagen alpha-2(I) chain, humanhuman

Predictions only

Length 1,366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2P08123 MTCL1P1-201ENST00000446207 792 ntBASIC20.07■□□□□ 0.8
COL1A2P08123 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
COL1A2P08123 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC20.07■□□□□ 0.8
COL1A2P08123 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC20.07■□□□□ 0.8
COL1A2P08123 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC20.07■□□□□ 0.8
COL1A2P08123 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC20.07■□□□□ 0.8
COL1A2P08123 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC20.07■□□□□ 0.8
COL1A2P08123 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
COL1A2P08123 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC20.06■□□□□ 0.8
COL1A2P08123 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC20.06■□□□□ 0.8
COL1A2P08123 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC20.06■□□□□ 0.8
COL1A2P08123 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
COL1A2P08123 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
COL1A2P08123 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
COL1A2P08123 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
COL1A2P08123 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
COL1A2P08123 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
COL1A2P08123 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
COL1A2P08123 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
COL1A2P08123 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC20.06■□□□□ 0.8
COL1A2P08123 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
COL1A2P08123 DFFB-203ENST00000341385 572 ntTSL 5 BASIC20.06■□□□□ 0.8
COL1A2P08123 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC20.06■□□□□ 0.8
COL1A2P08123 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
COL1A2P08123 WDR88-203ENST00000592765 651 ntTSL 5 BASIC20.06■□□□□ 0.8
COL1A2P08123 AC114341.1-201ENST00000618070 349 ntBASIC20.06■□□□□ 0.8
COL1A2P08123 AL031008.1-201ENST00000619963 541 ntBASIC20.06■□□□□ 0.8
COL1A2P08123 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
COL1A2P08123 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC20.05■□□□□ 0.8
COL1A2P08123 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
COL1A2P08123 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC20.05■□□□□ 0.8
COL1A2P08123 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
COL1A2P08123 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
COL1A2P08123 KRT8P10-201ENST00000450021 1447 ntBASIC20.05■□□□□ 0.8
COL1A2P08123 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
COL1A2P08123 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC20.05■□□□□ 0.8
COL1A2P08123 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC20.05■□□□□ 0.8
COL1A2P08123 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
COL1A2P08123 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
COL1A2P08123 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
COL1A2P08123 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
COL1A2P08123 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
COL1A2P08123 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC20.05■□□□□ 0.8
COL1A2P08123 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
COL1A2P08123 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
COL1A2P08123 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC20.05■□□□□ 0.8
COL1A2P08123 FDX1P1-201ENST00000449115 551 ntBASIC20.05■□□□□ 0.8
COL1A2P08123 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC20.05■□□□□ 0.8
COL1A2P08123 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC20.05■□□□□ 0.8
COL1A2P08123 CROCCP3-202ENST00000420820 1947 ntBASIC20.05■□□□□ 0.8
COL1A2P08123 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
COL1A2P08123 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC20.04■□□□□ 0.8
COL1A2P08123 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC20.04■□□□□ 0.8
COL1A2P08123 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
COL1A2P08123 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
COL1A2P08123 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
COL1A2P08123 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
COL1A2P08123 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC20.04■□□□□ 0.8
COL1A2P08123 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC20.04■□□□□ 0.8
COL1A2P08123 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
COL1A2P08123 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
COL1A2P08123 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
COL1A2P08123 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
COL1A2P08123 AKR1C7P-201ENST00000305623 895 ntBASIC20.04■□□□□ 0.8
COL1A2P08123 SAPCD2P3-201ENST00000455031 850 ntBASIC20.04■□□□□ 0.8
COL1A2P08123 AC096582.2-201ENST00000510860 516 ntBASIC20.04■□□□□ 0.8
COL1A2P08123 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC20.04■□□□□ 0.8
COL1A2P08123 KLK8-205ENST00000593490 267 ntTSL 3 BASIC20.04■□□□□ 0.8
COL1A2P08123 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
COL1A2P08123 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
COL1A2P08123 AC104692.2-201ENST00000603054 253 ntBASIC20.04■□□□□ 0.8
COL1A2P08123 REXO1L6P-202ENST00000619970 1078 ntBASIC20.04■□□□□ 0.8
COL1A2P08123 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
COL1A2P08123 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
COL1A2P08123 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
COL1A2P08123 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
COL1A2P08123 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
COL1A2P08123 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
COL1A2P08123 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC20.03■□□□□ 0.8
COL1A2P08123 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
COL1A2P08123 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
COL1A2P08123 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC20.03■□□□□ 0.8
COL1A2P08123 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC20.03■□□□□ 0.8
COL1A2P08123 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
COL1A2P08123 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
COL1A2P08123 DANCR-204ENST00000444958 709 ntTSL 3 BASIC20.03■□□□□ 0.8
COL1A2P08123 AC079781.3-201ENST00000449110 356 ntBASIC20.03■□□□□ 0.8
COL1A2P08123 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC20.03■□□□□ 0.8
COL1A2P08123 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC20.03■□□□□ 0.8
COL1A2P08123 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC20.03■□□□□ 0.8
COL1A2P08123 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
COL1A2P08123 AL160237.2-201ENST00000556165 472 ntBASIC20.03■□□□□ 0.8
COL1A2P08123 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
COL1A2P08123 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
COL1A2P08123 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC20.03■□□□□ 0.8
COL1A2P08123 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC20.03■□□□□ 0.8
COL1A2P08123 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
COL1A2P08123 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
COL1A2P08123 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC20.03■□□□□ 0.8
COL1A2P08123 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms