Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RB1P06400 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC19.36■□□□□ 0.69
RB1P06400 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
RB1P06400 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RB1P06400 GGCT-205ENST00000409436 954 ntTSL 3 BASIC19.36■□□□□ 0.69
RB1P06400 RAB17-203ENST00000409576 466 ntTSL 3 BASIC19.36■□□□□ 0.69
RB1P06400 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC19.36■□□□□ 0.69
RB1P06400 AC098831.1-202ENST00000438821 336 ntBASIC19.36■□□□□ 0.69
RB1P06400 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC19.36■□□□□ 0.69
RB1P06400 NMU-202ENST00000505262 693 ntTSL 3 BASIC19.36■□□□□ 0.69
RB1P06400 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC19.36■□□□□ 0.69
RB1P06400 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC19.36■□□□□ 0.69
RB1P06400 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC19.36■□□□□ 0.69
RB1P06400 PAM16-208ENST00000573553 722 ntTSL 2 BASIC19.36■□□□□ 0.69
RB1P06400 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC19.36■□□□□ 0.69
RB1P06400 PNMT-203ENST00000581428 677 ntTSL 2 BASIC19.36■□□□□ 0.69
RB1P06400 Z83851.2-201ENST00000609564 659 ntBASIC19.36■□□□□ 0.69
RB1P06400 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RB1P06400 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.36■□□□□ 0.69
RB1P06400 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RB1P06400 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RB1P06400 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RB1P06400 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RB1P06400 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC19.36■□□□□ 0.69
RB1P06400 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
RB1P06400 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RB1P06400 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RB1P06400 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC19.35■□□□□ 0.69
RB1P06400 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
RB1P06400 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
RB1P06400 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC19.35■□□□□ 0.69
RB1P06400 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
RB1P06400 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
RB1P06400 INIP-202ENST00000374236 874 ntTSL 2 BASIC19.35■□□□□ 0.69
RB1P06400 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RB1P06400 RPSAP43-201ENST00000402237 625 ntBASIC19.35■□□□□ 0.69
RB1P06400 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
RB1P06400 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
RB1P06400 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC19.35■□□□□ 0.69
RB1P06400 KRT18P3-201ENST00000451602 1288 ntBASIC19.35■□□□□ 0.69
RB1P06400 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC19.35■□□□□ 0.69
RB1P06400 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC19.35■□□□□ 0.69
RB1P06400 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC19.35■□□□□ 0.69
RB1P06400 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RB1P06400 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC19.35■□□□□ 0.69
RB1P06400 AC083906.6-201ENST00000641366 219 ntBASIC19.35■□□□□ 0.69
RB1P06400 AC079781.4-201ENST00000641908 219 ntBASIC19.35■□□□□ 0.69
RB1P06400 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RB1P06400 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
RB1P06400 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RB1P06400 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
RB1P06400 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC19.35■□□□□ 0.69
RB1P06400 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
RB1P06400 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RB1P06400 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
RB1P06400 NARF-204ENST00000390006 1766 ntTSL 2 BASIC19.34■□□□□ 0.69
RB1P06400 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
RB1P06400 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RB1P06400 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
RB1P06400 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
RB1P06400 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RB1P06400 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RB1P06400 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RB1P06400 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RB1P06400 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC19.34■□□□□ 0.69
RB1P06400 DNAJB3-201ENST00000446806 729 ntBASIC19.34■□□□□ 0.69
RB1P06400 AC092910.1-201ENST00000482027 1129 ntBASIC19.34■□□□□ 0.69
RB1P06400 RNA5SP415-201ENST00000517246 115 ntBASIC19.34■□□□□ 0.69
RB1P06400 AC040169.1-201ENST00000565382 521 ntBASIC19.34■□□□□ 0.69
RB1P06400 MIR3687-2-201ENST00000577708 61 ntBASIC19.34■□□□□ 0.69
RB1P06400 MIR3687-1-201ENST00000614492 61 ntBASIC19.34■□□□□ 0.69
RB1P06400 AL139288.1-201ENST00000623748 933 ntBASIC19.34■□□□□ 0.69
RB1P06400 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
RB1P06400 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.34■□□□□ 0.69
RB1P06400 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RB1P06400 ADM-207ENST00000530439 1839 ntTSL 2 BASIC19.34■□□□□ 0.69
RB1P06400 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
RB1P06400 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RB1P06400 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC19.34■□□□□ 0.69
RB1P06400 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
RB1P06400 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RB1P06400 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RB1P06400 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RB1P06400 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
RB1P06400 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.69
RB1P06400 AIRN-201ENST00000601203 4374 ntBASIC19.33■□□□□ 0.69
RB1P06400 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
RB1P06400 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
RB1P06400 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC19.33■□□□□ 0.69
RB1P06400 UROS-202ENST00000368778 1556 ntTSL 2 BASIC19.33■□□□□ 0.69
RB1P06400 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.69
RB1P06400 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
RB1P06400 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC19.33■□□□□ 0.69
RB1P06400 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
RB1P06400 GPX1P2-201ENST00000429271 606 ntBASIC19.33■□□□□ 0.68
RB1P06400 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC19.33■□□□□ 0.68
RB1P06400 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC19.33■□□□□ 0.68
RB1P06400 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC19.33■□□□□ 0.68
RB1P06400 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC19.33■□□□□ 0.68
RB1P06400 AC008735.5-201ENST00000623544 497 ntBASIC19.33■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms