Protein–RNA interactions for Protein: P04035

HMGCR, 3-hydroxy-3-methylglutaryl-coenzyme A reductase, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCRP04035 RPSAP43-201ENST00000402237 625 ntBASIC20.66■□□□□ 0.9
HMGCRP04035 NMU-202ENST00000505262 693 ntTSL 3 BASIC20.66■□□□□ 0.9
HMGCRP04035 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC20.66■□□□□ 0.9
HMGCRP04035 AC009533.2-201ENST00000543664 586 ntBASIC20.66■□□□□ 0.9
HMGCRP04035 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC20.66■□□□□ 0.9
HMGCRP04035 AC034105.1-201ENST00000563488 319 ntBASIC20.66■□□□□ 0.9
HMGCRP04035 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC20.66■□□□□ 0.9
HMGCRP04035 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC20.66■□□□□ 0.9
HMGCRP04035 AC008687.5-201ENST00000593746 558 ntBASIC20.66■□□□□ 0.9
HMGCRP04035 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
HMGCRP04035 HLA-J-201ENST00000462773 1622 ntBASIC20.66■□□□□ 0.9
HMGCRP04035 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HMGCRP04035 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HMGCRP04035 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HMGCRP04035 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC20.66■□□□□ 0.9
HMGCRP04035 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HMGCRP04035 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
HMGCRP04035 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HMGCRP04035 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
HMGCRP04035 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
HMGCRP04035 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC20.65■□□□□ 0.9
HMGCRP04035 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
HMGCRP04035 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
HMGCRP04035 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC20.65■□□□□ 0.9
HMGCRP04035 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HMGCRP04035 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
HMGCRP04035 DANCR-204ENST00000444958 709 ntTSL 3 BASIC20.65■□□□□ 0.9
HMGCRP04035 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC20.65■□□□□ 0.9
HMGCRP04035 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
HMGCRP04035 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC20.65■□□□□ 0.9
HMGCRP04035 PAM16-208ENST00000573553 722 ntTSL 2 BASIC20.65■□□□□ 0.9
HMGCRP04035 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC20.65■□□□□ 0.9
HMGCRP04035 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC20.65■□□□□ 0.9
HMGCRP04035 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HMGCRP04035 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HMGCRP04035 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
HMGCRP04035 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
HMGCRP04035 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
HMGCRP04035 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
HMGCRP04035 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC20.64■□□□□ 0.9
HMGCRP04035 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
HMGCRP04035 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.9
HMGCRP04035 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
HMGCRP04035 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
HMGCRP04035 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
HMGCRP04035 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
HMGCRP04035 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
HMGCRP04035 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
HMGCRP04035 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
HMGCRP04035 IMP4-203ENST00000409935 958 ntTSL 5 BASIC20.64■□□□□ 0.89
HMGCRP04035 RPS2P1-201ENST00000434010 821 ntBASIC20.64■□□□□ 0.89
HMGCRP04035 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC20.64■□□□□ 0.89
HMGCRP04035 URGCP-206ENST00000446958 365 ntTSL 2 BASIC20.64■□□□□ 0.89
HMGCRP04035 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
HMGCRP04035 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
HMGCRP04035 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
HMGCRP04035 INTS4P1-201ENST00000438455 1935 ntBASIC20.64■□□□□ 0.89
HMGCRP04035 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
HMGCRP04035 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
HMGCRP04035 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC20.64■□□□□ 0.89
HMGCRP04035 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC20.64■□□□□ 0.89
HMGCRP04035 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
HMGCRP04035 AL163051.1-201ENST00000569214 1512 ntBASIC20.63■□□□□ 0.89
HMGCRP04035 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
HMGCRP04035 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC20.63■□□□□ 0.89
HMGCRP04035 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
HMGCRP04035 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
HMGCRP04035 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
HMGCRP04035 MEG3-211ENST00000452514 461 ntTSL 3 BASIC20.63■□□□□ 0.89
HMGCRP04035 AC092910.1-201ENST00000482027 1129 ntBASIC20.63■□□□□ 0.89
HMGCRP04035 SART3-203ENST00000546611 1184 ntBASIC20.63■□□□□ 0.89
HMGCRP04035 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC20.63■□□□□ 0.89
HMGCRP04035 AC027796.2-201ENST00000575326 344 ntBASIC20.63■□□□□ 0.89
HMGCRP04035 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC20.63■□□□□ 0.89
HMGCRP04035 LINC02084-201ENST00000606069 1096 ntBASIC20.63■□□□□ 0.89
HMGCRP04035 Z83851.2-201ENST00000609564 659 ntBASIC20.63■□□□□ 0.89
HMGCRP04035 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC20.63■□□□□ 0.89
HMGCRP04035 AC083906.6-201ENST00000641366 219 ntBASIC20.63■□□□□ 0.89
HMGCRP04035 AC079781.4-201ENST00000641908 219 ntBASIC20.63■□□□□ 0.89
HMGCRP04035 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC20.63■□□□□ 0.89
HMGCRP04035 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
HMGCRP04035 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
HMGCRP04035 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC20.63■□□□□ 0.89
HMGCRP04035 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
HMGCRP04035 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC20.63■□□□□ 0.89
HMGCRP04035 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
HMGCRP04035 AP005117.1-201ENST00000584346 1413 ntBASIC20.62■□□□□ 0.89
HMGCRP04035 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
HMGCRP04035 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC20.62■□□□□ 0.89
HMGCRP04035 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
HMGCRP04035 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
HMGCRP04035 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC20.62■□□□□ 0.89
HMGCRP04035 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
HMGCRP04035 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
HMGCRP04035 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC20.62■□□□□ 0.89
HMGCRP04035 DNAJB3-201ENST00000446806 729 ntBASIC20.62■□□□□ 0.89
HMGCRP04035 KRT18P3-201ENST00000451602 1288 ntBASIC20.62■□□□□ 0.89
HMGCRP04035 MIR3687-2-201ENST00000577708 61 ntBASIC20.62■□□□□ 0.89
HMGCRP04035 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC20.62■□□□□ 0.89
HMGCRP04035 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms