Protein–RNA interactions for Protein: O95503

CBX6, Chromobox protein homolog 6, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX6O95503 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC18.32■□□□□ 0.52
CBX6O95503 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CBX6O95503 TMPOP1-202ENST00000424642 1267 ntBASIC18.32■□□□□ 0.52
CBX6O95503 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CBX6O95503 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC18.32■□□□□ 0.52
CBX6O95503 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CBX6O95503 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC18.32■□□□□ 0.52
CBX6O95503 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
CBX6O95503 AL353708.3-201ENST00000610272 989 ntBASIC18.32■□□□□ 0.52
CBX6O95503 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CBX6O95503 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
CBX6O95503 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC18.32■□□□□ 0.52
CBX6O95503 AC108860.2-201ENST00000562760 2183 ntBASIC18.32■□□□□ 0.52
CBX6O95503 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CBX6O95503 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CBX6O95503 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CBX6O95503 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
CBX6O95503 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CBX6O95503 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC18.32■□□□□ 0.52
CBX6O95503 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CBX6O95503 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CBX6O95503 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC18.32■□□□□ 0.52
CBX6O95503 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC18.31■□□□□ 0.52
CBX6O95503 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CBX6O95503 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CBX6O95503 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CBX6O95503 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CBX6O95503 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CBX6O95503 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
CBX6O95503 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
CBX6O95503 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC18.31■□□□□ 0.52
CBX6O95503 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CBX6O95503 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC18.31■□□□□ 0.52
CBX6O95503 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CBX6O95503 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CBX6O95503 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CBX6O95503 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CBX6O95503 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
CBX6O95503 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC18.3■□□□□ 0.52
CBX6O95503 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CBX6O95503 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CBX6O95503 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CBX6O95503 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
CBX6O95503 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CBX6O95503 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
CBX6O95503 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CBX6O95503 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
CBX6O95503 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CBX6O95503 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CBX6O95503 RER1-204ENST00000378518 522 ntTSL 3 BASIC18.3■□□□□ 0.52
CBX6O95503 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC18.3■□□□□ 0.52
CBX6O95503 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CBX6O95503 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
CBX6O95503 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC18.3■□□□□ 0.52
CBX6O95503 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC18.3■□□□□ 0.52
CBX6O95503 AC026471.5-201ENST00000615068 467 ntBASIC18.3■□□□□ 0.52
CBX6O95503 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC18.3■□□□□ 0.52
CBX6O95503 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CBX6O95503 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CBX6O95503 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CBX6O95503 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CBX6O95503 AC138028.4-201ENST00000564984 1845 ntBASIC18.3■□□□□ 0.52
CBX6O95503 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC18.3■□□□□ 0.52
CBX6O95503 NF2-208ENST00000403435 2568 ntTSL 5 BASIC18.3■□□□□ 0.52
CBX6O95503 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CBX6O95503 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC18.3■□□□□ 0.52
CBX6O95503 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC18.3■□□□□ 0.52
CBX6O95503 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CBX6O95503 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CBX6O95503 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC18.29■□□□□ 0.52
CBX6O95503 GOLGA6L3-201ENST00000507199 1679 ntBASIC18.29■□□□□ 0.52
CBX6O95503 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CBX6O95503 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CBX6O95503 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CBX6O95503 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CBX6O95503 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
CBX6O95503 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC18.29■□□□□ 0.52
CBX6O95503 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CBX6O95503 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
CBX6O95503 NME1-207ENST00000480143 964 ntTSL 2 BASIC18.29■□□□□ 0.52
CBX6O95503 KRT18P35-201ENST00000510488 1269 ntBASIC18.29■□□□□ 0.52
CBX6O95503 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC18.29■□□□□ 0.52
CBX6O95503 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CBX6O95503 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
CBX6O95503 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC18.29■□□□□ 0.52
CBX6O95503 AP003071.4-201ENST00000562276 1284 ntBASIC18.29■□□□□ 0.52
CBX6O95503 RN7SL850P-201ENST00000579959 291 ntBASIC18.29■□□□□ 0.52
CBX6O95503 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
CBX6O95503 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
CBX6O95503 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC18.29■□□□□ 0.52
CBX6O95503 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
CBX6O95503 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CBX6O95503 KRT8P8-201ENST00000434750 1448 ntBASIC18.29■□□□□ 0.52
CBX6O95503 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CBX6O95503 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CBX6O95503 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CBX6O95503 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CBX6O95503 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC18.29■□□□□ 0.52
CBX6O95503 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
CBX6O95503 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms