Protein–RNA interactions for Protein: O94913

PCF11, Pre-mRNA cleavage complex 2 protein Pcf11, humanhuman

Known RBP Predictions only

Length 1,555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11O94913 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC28.49■■■□□ 2.15
PCF11O94913 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC28.49■■■□□ 2.15
PCF11O94913 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC28.49■■■□□ 2.15
PCF11O94913 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
PCF11O94913 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC28.49■■■□□ 2.15
PCF11O94913 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC28.49■■■□□ 2.15
PCF11O94913 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
PCF11O94913 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
PCF11O94913 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC28.49■■■□□ 2.15
PCF11O94913 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC28.49■■■□□ 2.15
PCF11O94913 THAP5-204ENST00000438865 868 ntTSL 2 BASIC28.49■■■□□ 2.15
PCF11O94913 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC28.49■■■□□ 2.15
PCF11O94913 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC28.49■■■□□ 2.15
PCF11O94913 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC28.49■■■□□ 2.15
PCF11O94913 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC28.49■■■□□ 2.15
PCF11O94913 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC28.49■■■□□ 2.15
PCF11O94913 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC28.49■■■□□ 2.15
PCF11O94913 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC28.49■■■□□ 2.15
PCF11O94913 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC28.49■■■□□ 2.15
PCF11O94913 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
PCF11O94913 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
PCF11O94913 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC28.48■■■□□ 2.15
PCF11O94913 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
PCF11O94913 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
PCF11O94913 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC28.48■■■□□ 2.15
PCF11O94913 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
PCF11O94913 IL9RP2-201ENST00000423948 1312 ntBASIC28.48■■■□□ 2.15
PCF11O94913 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
PCF11O94913 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC28.48■■■□□ 2.15
PCF11O94913 AC068472.1-201ENST00000474589 881 ntBASIC28.48■■■□□ 2.15
PCF11O94913 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC28.48■■■□□ 2.15
PCF11O94913 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
PCF11O94913 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC28.48■■■□□ 2.15
PCF11O94913 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC28.48■■■□□ 2.15
PCF11O94913 LINC00602-201ENST00000629776 2065 ntBASIC28.48■■■□□ 2.15
PCF11O94913 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC28.48■■■□□ 2.15
PCF11O94913 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC28.47■■■□□ 2.15
PCF11O94913 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC28.47■■■□□ 2.15
PCF11O94913 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
PCF11O94913 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
PCF11O94913 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC28.47■■■□□ 2.15
PCF11O94913 GGCT-205ENST00000409436 954 ntTSL 3 BASIC28.47■■■□□ 2.15
PCF11O94913 BX842568.4-201ENST00000421222 227 ntBASIC28.47■■■□□ 2.15
PCF11O94913 KRT18P65-201ENST00000439811 1286 ntBASIC28.47■■■□□ 2.15
PCF11O94913 KRT18P58-201ENST00000527480 1120 ntBASIC28.47■■■□□ 2.15
PCF11O94913 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC28.47■■■□□ 2.15
PCF11O94913 AP001005.1-201ENST00000571755 1248 ntBASIC28.47■■■□□ 2.15
PCF11O94913 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC28.47■■■□□ 2.15
PCF11O94913 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC28.47■■■□□ 2.15
PCF11O94913 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC28.47■■■□□ 2.15
PCF11O94913 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC28.47■■■□□ 2.15
PCF11O94913 TP73-AS1-210ENST00000637775 1455 ntBASIC28.47■■■□□ 2.15
PCF11O94913 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC28.47■■■□□ 2.15
PCF11O94913 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC28.46■■■□□ 2.15
PCF11O94913 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC28.46■■■□□ 2.15
PCF11O94913 SNCG-201ENST00000348795 684 ntTSL 2 BASIC28.46■■■□□ 2.15
PCF11O94913 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC28.46■■■□□ 2.15
PCF11O94913 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC28.46■■■□□ 2.15
PCF11O94913 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC28.46■■■□□ 2.15
PCF11O94913 POM121L3P-201ENST00000419331 1163 ntBASIC28.46■■■□□ 2.15
PCF11O94913 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
PCF11O94913 LINC01711-201ENST00000598340 967 ntBASIC28.46■■■□□ 2.15
PCF11O94913 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
PCF11O94913 INTS4P1-201ENST00000438455 1935 ntBASIC28.46■■■□□ 2.15
PCF11O94913 AC125634.1-201ENST00000438758 1403 ntBASIC28.46■■■□□ 2.15
PCF11O94913 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC28.46■■■□□ 2.15
PCF11O94913 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC28.45■■■□□ 2.15
PCF11O94913 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC28.45■■■□□ 2.15
PCF11O94913 PMS2P2-201ENST00000425039 1128 ntBASIC28.45■■■□□ 2.15
PCF11O94913 MTCL1P1-201ENST00000446207 792 ntBASIC28.45■■■□□ 2.15
PCF11O94913 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC28.45■■■□□ 2.15
PCF11O94913 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC28.45■■■□□ 2.15
PCF11O94913 KRT8P47-201ENST00000604727 1398 ntBASIC28.45■■■□□ 2.14
PCF11O94913 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC28.45■■■□□ 2.14
PCF11O94913 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC28.45■■■□□ 2.14
PCF11O94913 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC28.45■■■□□ 2.14
PCF11O94913 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC28.45■■■□□ 2.14
PCF11O94913 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC28.45■■■□□ 2.14
PCF11O94913 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC28.45■■■□□ 2.14
PCF11O94913 AC011467.2-201ENST00000598425 242 ntBASIC28.45■■■□□ 2.14
PCF11O94913 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC28.45■■■□□ 2.14
PCF11O94913 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC28.45■■■□□ 2.14
PCF11O94913 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
PCF11O94913 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC28.44■■■□□ 2.14
PCF11O94913 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC28.44■■■□□ 2.14
PCF11O94913 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC28.44■■■□□ 2.14
PCF11O94913 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC28.44■■■□□ 2.14
PCF11O94913 RCN1P2-201ENST00000398357 915 ntBASIC28.44■■■□□ 2.14
PCF11O94913 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC28.44■■■□□ 2.14
PCF11O94913 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC28.44■■■□□ 2.14
PCF11O94913 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC28.44■■■□□ 2.14
PCF11O94913 AL139424.1-201ENST00000607572 797 ntBASIC28.44■■■□□ 2.14
PCF11O94913 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC28.44■■■□□ 2.14
PCF11O94913 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC28.44■■■□□ 2.14
PCF11O94913 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC28.44■■■□□ 2.14
PCF11O94913 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC28.44■■■□□ 2.14
PCF11O94913 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC28.43■■■□□ 2.14
PCF11O94913 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC28.43■■■□□ 2.14
PCF11O94913 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC28.43■■■□□ 2.14
PCF11O94913 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC28.43■■■□□ 2.14
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms