Protein–RNA interactions for Protein: O75489

NDUFS3, NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3O75489 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NDUFS3O75489 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NDUFS3O75489 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NDUFS3O75489 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NDUFS3O75489 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC18.31■□□□□ 0.52
NDUFS3O75489 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
NDUFS3O75489 MIR149-201ENST00000384879 89 ntBASIC18.31■□□□□ 0.52
NDUFS3O75489 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC18.31■□□□□ 0.52
NDUFS3O75489 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC18.31■□□□□ 0.52
NDUFS3O75489 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC18.31■□□□□ 0.52
NDUFS3O75489 GXYLT1P3-201ENST00000453058 1193 ntBASIC18.31■□□□□ 0.52
NDUFS3O75489 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
NDUFS3O75489 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
NDUFS3O75489 TMA16-209ENST00000513272 803 ntTSL 2 BASIC18.31■□□□□ 0.52
NDUFS3O75489 AC009065.1-201ENST00000564055 1225 ntBASIC18.31■□□□□ 0.52
NDUFS3O75489 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC18.31■□□□□ 0.52
NDUFS3O75489 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC18.31■□□□□ 0.52
NDUFS3O75489 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
NDUFS3O75489 AC099343.3-201ENST00000605834 2503 ntBASIC18.31■□□□□ 0.52
NDUFS3O75489 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC18.31■□□□□ 0.52
NDUFS3O75489 AC135776.1-201ENST00000319817 2481 ntBASIC18.31■□□□□ 0.52
NDUFS3O75489 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
NDUFS3O75489 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NDUFS3O75489 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
NDUFS3O75489 AC009102.3-201ENST00000623118 1491 ntBASIC18.31■□□□□ 0.52
NDUFS3O75489 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
NDUFS3O75489 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
NDUFS3O75489 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
NDUFS3O75489 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC18.31■□□□□ 0.52
NDUFS3O75489 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC18.31■□□□□ 0.52
NDUFS3O75489 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NDUFS3O75489 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC18.3■□□□□ 0.52
NDUFS3O75489 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NDUFS3O75489 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
NDUFS3O75489 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
NDUFS3O75489 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
NDUFS3O75489 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NDUFS3O75489 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
NDUFS3O75489 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NDUFS3O75489 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
NDUFS3O75489 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NDUFS3O75489 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC18.3■□□□□ 0.52
NDUFS3O75489 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC18.3■□□□□ 0.52
NDUFS3O75489 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC18.3■□□□□ 0.52
NDUFS3O75489 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NDUFS3O75489 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
NDUFS3O75489 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC18.3■□□□□ 0.52
NDUFS3O75489 AC009947.2-201ENST00000444014 672 ntBASIC18.3■□□□□ 0.52
NDUFS3O75489 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC18.3■□□□□ 0.52
NDUFS3O75489 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC18.3■□□□□ 0.52
NDUFS3O75489 AC104390.1-201ENST00000555663 520 ntBASIC18.3■□□□□ 0.52
NDUFS3O75489 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC18.3■□□□□ 0.52
NDUFS3O75489 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
NDUFS3O75489 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NDUFS3O75489 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NDUFS3O75489 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC18.3■□□□□ 0.52
NDUFS3O75489 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC18.3■□□□□ 0.52
NDUFS3O75489 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
NDUFS3O75489 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NDUFS3O75489 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
NDUFS3O75489 GMCL1P1-201ENST00000463439 1581 ntBASIC18.3■□□□□ 0.52
NDUFS3O75489 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC18.29■□□□□ 0.52
NDUFS3O75489 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC18.29■□□□□ 0.52
NDUFS3O75489 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
NDUFS3O75489 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
NDUFS3O75489 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NDUFS3O75489 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NDUFS3O75489 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC18.29■□□□□ 0.52
NDUFS3O75489 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
NDUFS3O75489 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NDUFS3O75489 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
NDUFS3O75489 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NDUFS3O75489 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NDUFS3O75489 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
NDUFS3O75489 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NDUFS3O75489 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NDUFS3O75489 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NDUFS3O75489 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NDUFS3O75489 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NDUFS3O75489 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC18.29■□□□□ 0.52
NDUFS3O75489 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC18.29■□□□□ 0.52
NDUFS3O75489 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
NDUFS3O75489 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
NDUFS3O75489 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC18.29■□□□□ 0.52
NDUFS3O75489 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
NDUFS3O75489 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NDUFS3O75489 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NDUFS3O75489 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
NDUFS3O75489 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NDUFS3O75489 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NDUFS3O75489 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
NDUFS3O75489 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NDUFS3O75489 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NDUFS3O75489 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
NDUFS3O75489 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NDUFS3O75489 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
NDUFS3O75489 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC18.29■□□□□ 0.52
NDUFS3O75489 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
NDUFS3O75489 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
NDUFS3O75489 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 77.1 ms