Protein–RNA interactions for Protein: O60637

TSPAN3, Tetraspanin-3, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3O60637 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TSPAN3O60637 AL031598.1-201ENST00000561511 1773 ntBASIC18.88■□□□□ 0.61
TSPAN3O60637 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TSPAN3O60637 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TSPAN3O60637 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC18.88■□□□□ 0.61
TSPAN3O60637 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TSPAN3O60637 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TSPAN3O60637 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
TSPAN3O60637 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TSPAN3O60637 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TSPAN3O60637 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TSPAN3O60637 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC18.88■□□□□ 0.61
TSPAN3O60637 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC18.88■□□□□ 0.61
TSPAN3O60637 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC18.88■□□□□ 0.61
TSPAN3O60637 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC18.88■□□□□ 0.61
TSPAN3O60637 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC18.88■□□□□ 0.61
TSPAN3O60637 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC18.88■□□□□ 0.61
TSPAN3O60637 TEN1-204ENST00000588202 862 ntTSL 3 BASIC18.88■□□□□ 0.61
TSPAN3O60637 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC18.88■□□□□ 0.61
TSPAN3O60637 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TSPAN3O60637 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC18.88■□□□□ 0.61
TSPAN3O60637 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TSPAN3O60637 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TSPAN3O60637 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TSPAN3O60637 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TSPAN3O60637 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
TSPAN3O60637 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TSPAN3O60637 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TSPAN3O60637 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
TSPAN3O60637 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TSPAN3O60637 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC18.88■□□□□ 0.61
TSPAN3O60637 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TSPAN3O60637 AC126763.1-201ENST00000552015 2118 ntBASIC18.88■□□□□ 0.61
TSPAN3O60637 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
TSPAN3O60637 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
TSPAN3O60637 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC18.87■□□□□ 0.61
TSPAN3O60637 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
TSPAN3O60637 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
TSPAN3O60637 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.87■□□□□ 0.61
TSPAN3O60637 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TSPAN3O60637 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TSPAN3O60637 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TSPAN3O60637 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TSPAN3O60637 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TSPAN3O60637 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TSPAN3O60637 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
TSPAN3O60637 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
TSPAN3O60637 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
TSPAN3O60637 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TSPAN3O60637 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TSPAN3O60637 ATP5G2P1-201ENST00000433580 426 ntBASIC18.87■□□□□ 0.61
TSPAN3O60637 AP002383.4-201ENST00000442518 975 ntBASIC18.87■□□□□ 0.61
TSPAN3O60637 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC18.87■□□□□ 0.61
TSPAN3O60637 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC18.87■□□□□ 0.61
TSPAN3O60637 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
TSPAN3O60637 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TSPAN3O60637 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC18.87■□□□□ 0.61
TSPAN3O60637 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
TSPAN3O60637 AL390719.2-201ENST00000606993 987 ntBASIC18.87■□□□□ 0.61
TSPAN3O60637 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
TSPAN3O60637 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC18.87■□□□□ 0.61
TSPAN3O60637 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC18.87■□□□□ 0.61
TSPAN3O60637 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
TSPAN3O60637 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC18.87■□□□□ 0.61
TSPAN3O60637 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TSPAN3O60637 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TSPAN3O60637 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TSPAN3O60637 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TSPAN3O60637 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC18.86■□□□□ 0.61
TSPAN3O60637 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC18.86■□□□□ 0.61
TSPAN3O60637 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
TSPAN3O60637 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
TSPAN3O60637 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
TSPAN3O60637 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
TSPAN3O60637 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
TSPAN3O60637 KRT18P1-202ENST00000452408 1331 ntBASIC18.86■□□□□ 0.61
TSPAN3O60637 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
TSPAN3O60637 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TSPAN3O60637 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
TSPAN3O60637 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TSPAN3O60637 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
TSPAN3O60637 IGHGP-201ENST00000390555 1178 ntBASIC18.86■□□□□ 0.61
TSPAN3O60637 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TSPAN3O60637 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC18.86■□□□□ 0.61
TSPAN3O60637 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TSPAN3O60637 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC18.86■□□□□ 0.61
TSPAN3O60637 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC18.86■□□□□ 0.61
TSPAN3O60637 KRT126P-201ENST00000549467 1181 ntBASIC18.86■□□□□ 0.61
TSPAN3O60637 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC18.86■□□□□ 0.61
TSPAN3O60637 AP002414.4-201ENST00000589764 1148 ntBASIC18.86■□□□□ 0.61
TSPAN3O60637 GPR32P1-201ENST00000601788 811 ntBASIC18.86■□□□□ 0.61
TSPAN3O60637 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
TSPAN3O60637 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
TSPAN3O60637 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
TSPAN3O60637 AC018445.3-201ENST00000624177 1945 ntBASIC18.86■□□□□ 0.61
TSPAN3O60637 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
TSPAN3O60637 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TSPAN3O60637 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC18.86■□□□□ 0.61
TSPAN3O60637 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
TSPAN3O60637 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms