Protein–RNA interactions for Protein: O60245

PCDH7, Protocadherin-7, humanhuman

Predictions only

Length 1,069 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH7O60245 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC17.54■□□□□ 0.4
PCDH7O60245 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDH7O60245 POR-209ENST00000439269 1858 ntTSL 2 BASIC17.54■□□□□ 0.4
PCDH7O60245 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PCDH7O60245 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
PCDH7O60245 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC17.54■□□□□ 0.4
PCDH7O60245 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDH7O60245 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PCDH7O60245 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDH7O60245 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
PCDH7O60245 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
PCDH7O60245 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDH7O60245 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDH7O60245 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC17.54■□□□□ 0.4
PCDH7O60245 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC17.54■□□□□ 0.4
PCDH7O60245 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PCDH7O60245 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDH7O60245 INGX-201ENST00000359239 846 ntBASIC17.54■□□□□ 0.4
PCDH7O60245 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
PCDH7O60245 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
PCDH7O60245 MIR149-201ENST00000384879 89 ntBASIC17.54■□□□□ 0.4
PCDH7O60245 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC17.54■□□□□ 0.4
PCDH7O60245 AC128688.1-201ENST00000487626 519 ntBASIC17.54■□□□□ 0.4
PCDH7O60245 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC17.54■□□□□ 0.4
PCDH7O60245 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PCDH7O60245 NAPSB-206ENST00000562112 1266 ntBASIC17.54■□□□□ 0.4
PCDH7O60245 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC17.54■□□□□ 0.4
PCDH7O60245 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC17.54■□□□□ 0.4
PCDH7O60245 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC17.54■□□□□ 0.4
PCDH7O60245 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDH7O60245 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDH7O60245 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC17.54■□□□□ 0.4
PCDH7O60245 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDH7O60245 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC17.54■□□□□ 0.4
PCDH7O60245 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDH7O60245 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDH7O60245 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDH7O60245 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDH7O60245 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC17.54■□□□□ 0.4
PCDH7O60245 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PCDH7O60245 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC17.54■□□□□ 0.4
PCDH7O60245 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC17.54■□□□□ 0.4
PCDH7O60245 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PCDH7O60245 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
PCDH7O60245 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC17.53■□□□□ 0.4
PCDH7O60245 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC17.53■□□□□ 0.4
PCDH7O60245 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PCDH7O60245 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PCDH7O60245 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC17.53■□□□□ 0.4
PCDH7O60245 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
PCDH7O60245 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PCDH7O60245 AC068880.1-201ENST00000507289 2297 ntBASIC17.53■□□□□ 0.4
PCDH7O60245 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PCDH7O60245 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC17.53■□□□□ 0.4
PCDH7O60245 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC17.53■□□□□ 0.4
PCDH7O60245 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
PCDH7O60245 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
PCDH7O60245 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PCDH7O60245 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PCDH7O60245 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PCDH7O60245 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PCDH7O60245 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PCDH7O60245 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PCDH7O60245 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
PCDH7O60245 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
PCDH7O60245 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
PCDH7O60245 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PCDH7O60245 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PCDH7O60245 UROS-202ENST00000368778 1556 ntTSL 2 BASIC17.53■□□□□ 0.4
PCDH7O60245 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
PCDH7O60245 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PCDH7O60245 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PCDH7O60245 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PCDH7O60245 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC17.52■□□□□ 0.4
PCDH7O60245 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC17.52■□□□□ 0.4
PCDH7O60245 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
PCDH7O60245 SDHAP2-201ENST00000455183 2001 ntBASIC17.52■□□□□ 0.4
PCDH7O60245 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PCDH7O60245 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
PCDH7O60245 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.4
PCDH7O60245 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PCDH7O60245 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC17.52■□□□□ 0.4
PCDH7O60245 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
PCDH7O60245 MMP23A-201ENST00000234610 1017 ntBASIC17.52■□□□□ 0.4
PCDH7O60245 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
PCDH7O60245 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PCDH7O60245 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC17.52■□□□□ 0.4
PCDH7O60245 AC093827.2-201ENST00000512654 315 ntBASIC17.52■□□□□ 0.4
PCDH7O60245 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
PCDH7O60245 REXO1L9P-201ENST00000604264 2108 ntBASIC17.52■□□□□ 0.4
PCDH7O60245 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PCDH7O60245 AC010947.1-201ENST00000623454 693 ntBASIC17.52■□□□□ 0.4
PCDH7O60245 AC112497.1-201ENST00000624824 639 ntBASIC17.52■□□□□ 0.4
PCDH7O60245 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC17.52■□□□□ 0.4
PCDH7O60245 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
PCDH7O60245 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PCDH7O60245 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC17.52■□□□□ 0.4
PCDH7O60245 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PCDH7O60245 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.39
PCDH7O60245 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms