Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC18.42■□□□□ 0.54
TRIM49D1C9J1S8 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
TRIM49D1C9J1S8 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
TRIM49D1C9J1S8 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRIM49D1C9J1S8 PHGDH-209ENST00000641074 1780 ntBASIC18.42■□□□□ 0.54
TRIM49D1C9J1S8 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRIM49D1C9J1S8 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC18.42■□□□□ 0.54
TRIM49D1C9J1S8 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRIM49D1C9J1S8 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC18.42■□□□□ 0.54
TRIM49D1C9J1S8 AC139713.2-201ENST00000641328 2723 ntBASIC18.42■□□□□ 0.54
TRIM49D1C9J1S8 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRIM49D1C9J1S8 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRIM49D1C9J1S8 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC18.41■□□□□ 0.54
TRIM49D1C9J1S8 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TRIM49D1C9J1S8 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC18.41■□□□□ 0.54
TRIM49D1C9J1S8 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRIM49D1C9J1S8 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC18.41■□□□□ 0.54
TRIM49D1C9J1S8 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRIM49D1C9J1S8 AL023284.2-201ENST00000405850 579 ntBASIC18.41■□□□□ 0.54
TRIM49D1C9J1S8 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC18.41■□□□□ 0.54
TRIM49D1C9J1S8 B3GAT3P1-201ENST00000471720 806 ntBASIC18.41■□□□□ 0.54
TRIM49D1C9J1S8 EMC9-206ENST00000560403 872 ntTSL 2 BASIC18.41■□□□□ 0.54
TRIM49D1C9J1S8 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC18.41■□□□□ 0.54
TRIM49D1C9J1S8 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC18.41■□□□□ 0.54
TRIM49D1C9J1S8 MIR6786-201ENST00000616843 113 ntBASIC18.41■□□□□ 0.54
TRIM49D1C9J1S8 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
TRIM49D1C9J1S8 TBCB-214ENST00000629269 413 ntTSL 5 BASIC18.41■□□□□ 0.54
TRIM49D1C9J1S8 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC18.41■□□□□ 0.54
TRIM49D1C9J1S8 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRIM49D1C9J1S8 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC18.41■□□□□ 0.54
TRIM49D1C9J1S8 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRIM49D1C9J1S8 FST-202ENST00000396947 2538 ntTSL 5 BASIC18.41■□□□□ 0.54
TRIM49D1C9J1S8 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC18.41■□□□□ 0.54
TRIM49D1C9J1S8 KRT8P50-201ENST00000562022 1438 ntBASIC18.4■□□□□ 0.54
TRIM49D1C9J1S8 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRIM49D1C9J1S8 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRIM49D1C9J1S8 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRIM49D1C9J1S8 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRIM49D1C9J1S8 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRIM49D1C9J1S8 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
TRIM49D1C9J1S8 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC18.4■□□□□ 0.54
TRIM49D1C9J1S8 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC18.4■□□□□ 0.54
TRIM49D1C9J1S8 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TRIM49D1C9J1S8 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
TRIM49D1C9J1S8 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
TRIM49D1C9J1S8 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRIM49D1C9J1S8 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TRIM49D1C9J1S8 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
TRIM49D1C9J1S8 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TRIM49D1C9J1S8 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TRIM49D1C9J1S8 ADM-205ENST00000528544 586 ntTSL 2 BASIC18.4■□□□□ 0.54
TRIM49D1C9J1S8 KRT18P6-201ENST00000555540 1265 ntBASIC18.4■□□□□ 0.54
TRIM49D1C9J1S8 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC18.4■□□□□ 0.54
TRIM49D1C9J1S8 AC006058.3-201ENST00000606217 1069 ntBASIC18.4■□□□□ 0.54
TRIM49D1C9J1S8 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRIM49D1C9J1S8 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC18.4■□□□□ 0.54
TRIM49D1C9J1S8 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TRIM49D1C9J1S8 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRIM49D1C9J1S8 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
TRIM49D1C9J1S8 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRIM49D1C9J1S8 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRIM49D1C9J1S8 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
TRIM49D1C9J1S8 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.54
TRIM49D1C9J1S8 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
TRIM49D1C9J1S8 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
TRIM49D1C9J1S8 AC012313.1-201ENST00000593393 3059 ntBASIC18.39■□□□□ 0.54
TRIM49D1C9J1S8 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRIM49D1C9J1S8 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
TRIM49D1C9J1S8 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRIM49D1C9J1S8 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRIM49D1C9J1S8 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
TRIM49D1C9J1S8 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRIM49D1C9J1S8 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TRIM49D1C9J1S8 GPAT2P1-201ENST00000444924 1672 ntBASIC18.39■□□□□ 0.53
TRIM49D1C9J1S8 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC18.39■□□□□ 0.53
TRIM49D1C9J1S8 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRIM49D1C9J1S8 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRIM49D1C9J1S8 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC18.39■□□□□ 0.53
TRIM49D1C9J1S8 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
TRIM49D1C9J1S8 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRIM49D1C9J1S8 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC18.39■□□□□ 0.53
TRIM49D1C9J1S8 ELP6-205ENST00000439305 880 ntTSL 2 BASIC18.39■□□□□ 0.53
TRIM49D1C9J1S8 MCCD1P1-208ENST00000445732 328 ntBASIC18.39■□□□□ 0.53
TRIM49D1C9J1S8 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRIM49D1C9J1S8 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC18.39■□□□□ 0.53
TRIM49D1C9J1S8 TK2-204ENST00000525974 1178 ntTSL 2 BASIC18.39■□□□□ 0.53
TRIM49D1C9J1S8 AF186192.3-201ENST00000583427 947 ntBASIC18.39■□□□□ 0.53
TRIM49D1C9J1S8 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
TRIM49D1C9J1S8 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRIM49D1C9J1S8 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRIM49D1C9J1S8 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
TRIM49D1C9J1S8 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
TRIM49D1C9J1S8 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TRIM49D1C9J1S8 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRIM49D1C9J1S8 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC18.39■□□□□ 0.53
TRIM49D1C9J1S8 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
TRIM49D1C9J1S8 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
TRIM49D1C9J1S8 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRIM49D1C9J1S8 CEP83-AS1-201ENST00000623122 2482 ntBASIC18.39■□□□□ 0.53
TRIM49D1C9J1S8 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms