Protein–RNA interactions for Protein: A0A0C4DH59

TRBV5-4, T-cell receptor beta variable 5-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-4A0A0C4DH59 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TRBV5-4A0A0C4DH59 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TRBV5-4A0A0C4DH59 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC18.05■□□□□ 0.48
TRBV5-4A0A0C4DH59 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC18.05■□□□□ 0.48
TRBV5-4A0A0C4DH59 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC18.05■□□□□ 0.48
TRBV5-4A0A0C4DH59 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TRBV5-4A0A0C4DH59 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRBV5-4A0A0C4DH59 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRBV5-4A0A0C4DH59 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC18.05■□□□□ 0.48
TRBV5-4A0A0C4DH59 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TRBV5-4A0A0C4DH59 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRBV5-4A0A0C4DH59 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRBV5-4A0A0C4DH59 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRBV5-4A0A0C4DH59 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
TRBV5-4A0A0C4DH59 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC18.04■□□□□ 0.48
TRBV5-4A0A0C4DH59 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
TRBV5-4A0A0C4DH59 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRBV5-4A0A0C4DH59 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC18.04■□□□□ 0.48
TRBV5-4A0A0C4DH59 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRBV5-4A0A0C4DH59 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRBV5-4A0A0C4DH59 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRBV5-4A0A0C4DH59 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
TRBV5-4A0A0C4DH59 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TRBV5-4A0A0C4DH59 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRBV5-4A0A0C4DH59 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC18.04■□□□□ 0.48
TRBV5-4A0A0C4DH59 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC18.04■□□□□ 0.48
TRBV5-4A0A0C4DH59 NME3-204ENST00000563498 920 ntTSL 2 BASIC18.04■□□□□ 0.48
TRBV5-4A0A0C4DH59 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRBV5-4A0A0C4DH59 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC18.04■□□□□ 0.48
TRBV5-4A0A0C4DH59 LITAF-220ENST00000620789 692 ntTSL 5 BASIC18.04■□□□□ 0.48
TRBV5-4A0A0C4DH59 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRBV5-4A0A0C4DH59 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TRBV5-4A0A0C4DH59 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TRBV5-4A0A0C4DH59 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TRBV5-4A0A0C4DH59 LINC01311-201ENST00000565162 1445 ntBASIC18.04■□□□□ 0.48
TRBV5-4A0A0C4DH59 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRBV5-4A0A0C4DH59 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
TRBV5-4A0A0C4DH59 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRBV5-4A0A0C4DH59 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRBV5-4A0A0C4DH59 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
TRBV5-4A0A0C4DH59 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRBV5-4A0A0C4DH59 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRBV5-4A0A0C4DH59 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC18.04■□□□□ 0.48
TRBV5-4A0A0C4DH59 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRBV5-4A0A0C4DH59 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TRBV5-4A0A0C4DH59 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRBV5-4A0A0C4DH59 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRBV5-4A0A0C4DH59 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRBV5-4A0A0C4DH59 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TRBV5-4A0A0C4DH59 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC18.03■□□□□ 0.48
TRBV5-4A0A0C4DH59 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRBV5-4A0A0C4DH59 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRBV5-4A0A0C4DH59 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRBV5-4A0A0C4DH59 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRBV5-4A0A0C4DH59 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC18.03■□□□□ 0.48
TRBV5-4A0A0C4DH59 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC18.03■□□□□ 0.48
TRBV5-4A0A0C4DH59 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC18.03■□□□□ 0.48
TRBV5-4A0A0C4DH59 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC18.03■□□□□ 0.48
TRBV5-4A0A0C4DH59 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRBV5-4A0A0C4DH59 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRBV5-4A0A0C4DH59 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC18.03■□□□□ 0.48
TRBV5-4A0A0C4DH59 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRBV5-4A0A0C4DH59 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TRBV5-4A0A0C4DH59 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC18.03■□□□□ 0.48
TRBV5-4A0A0C4DH59 AL671277.2-201ENST00000458060 996 ntBASIC18.03■□□□□ 0.48
TRBV5-4A0A0C4DH59 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC18.03■□□□□ 0.48
TRBV5-4A0A0C4DH59 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC18.03■□□□□ 0.48
TRBV5-4A0A0C4DH59 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC18.03■□□□□ 0.48
TRBV5-4A0A0C4DH59 AL049597.2-201ENST00000565575 961 ntBASIC18.03■□□□□ 0.48
TRBV5-4A0A0C4DH59 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
TRBV5-4A0A0C4DH59 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC18.03■□□□□ 0.48
TRBV5-4A0A0C4DH59 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRBV5-4A0A0C4DH59 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
TRBV5-4A0A0C4DH59 LINC00167-201ENST00000530583 1419 ntBASIC18.03■□□□□ 0.48
TRBV5-4A0A0C4DH59 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRBV5-4A0A0C4DH59 SP100-208ENST00000427101 1922 ntTSL 2 BASIC18.03■□□□□ 0.48
TRBV5-4A0A0C4DH59 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRBV5-4A0A0C4DH59 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRBV5-4A0A0C4DH59 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TRBV5-4A0A0C4DH59 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TRBV5-4A0A0C4DH59 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRBV5-4A0A0C4DH59 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC18.03■□□□□ 0.48
TRBV5-4A0A0C4DH59 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
TRBV5-4A0A0C4DH59 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TRBV5-4A0A0C4DH59 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
TRBV5-4A0A0C4DH59 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TRBV5-4A0A0C4DH59 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC18.02■□□□□ 0.48
TRBV5-4A0A0C4DH59 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TRBV5-4A0A0C4DH59 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC18.02■□□□□ 0.48
TRBV5-4A0A0C4DH59 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
TRBV5-4A0A0C4DH59 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
TRBV5-4A0A0C4DH59 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
TRBV5-4A0A0C4DH59 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC18.02■□□□□ 0.48
TRBV5-4A0A0C4DH59 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC18.02■□□□□ 0.48
TRBV5-4A0A0C4DH59 VENTXP5-201ENST00000523979 775 ntBASIC18.02■□□□□ 0.48
TRBV5-4A0A0C4DH59 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC18.02■□□□□ 0.48
TRBV5-4A0A0C4DH59 SPEG-225ENST00000617028 815 ntTSL 5 BASIC18.02■□□□□ 0.48
TRBV5-4A0A0C4DH59 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
TRBV5-4A0A0C4DH59 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.47
TRBV5-4A0A0C4DH59 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC18.02■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms