Protein–RNA interactions for Protein: Q9Y5N1

HRH3, Histamine H3 receptor, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HRH3Q9Y5N1 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC16.97■□□□□ 0.31
HRH3Q9Y5N1 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
HRH3Q9Y5N1 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC16.97■□□□□ 0.31
HRH3Q9Y5N1 NEK4P2-201ENST00000580004 1012 ntBASIC16.97■□□□□ 0.31
HRH3Q9Y5N1 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC16.97■□□□□ 0.31
HRH3Q9Y5N1 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC16.97■□□□□ 0.31
HRH3Q9Y5N1 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC16.97■□□□□ 0.31
HRH3Q9Y5N1 AC083849.1-201ENST00000615227 514 ntBASIC16.97■□□□□ 0.31
HRH3Q9Y5N1 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC16.97■□□□□ 0.31
HRH3Q9Y5N1 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HRH3Q9Y5N1 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
HRH3Q9Y5N1 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HRH3Q9Y5N1 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
HRH3Q9Y5N1 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
HRH3Q9Y5N1 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
HRH3Q9Y5N1 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
HRH3Q9Y5N1 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
HRH3Q9Y5N1 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HRH3Q9Y5N1 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC16.97■□□□□ 0.31
HRH3Q9Y5N1 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
HRH3Q9Y5N1 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
HRH3Q9Y5N1 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
HRH3Q9Y5N1 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HRH3Q9Y5N1 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
HRH3Q9Y5N1 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC16.96■□□□□ 0.31
HRH3Q9Y5N1 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
HRH3Q9Y5N1 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC16.96■□□□□ 0.31
HRH3Q9Y5N1 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HRH3Q9Y5N1 STARP1-201ENST00000397973 869 ntBASIC16.96■□□□□ 0.31
HRH3Q9Y5N1 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC16.96■□□□□ 0.31
HRH3Q9Y5N1 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC16.96■□□□□ 0.31
HRH3Q9Y5N1 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC16.96■□□□□ 0.31
HRH3Q9Y5N1 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC16.96■□□□□ 0.31
HRH3Q9Y5N1 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC16.96■□□□□ 0.31
HRH3Q9Y5N1 AL136038.3-201ENST00000561909 1096 ntBASIC16.96■□□□□ 0.31
HRH3Q9Y5N1 AC093458.2-201ENST00000623150 629 ntBASIC16.96■□□□□ 0.31
HRH3Q9Y5N1 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC16.96■□□□□ 0.31
HRH3Q9Y5N1 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
HRH3Q9Y5N1 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
HRH3Q9Y5N1 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
HRH3Q9Y5N1 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
HRH3Q9Y5N1 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
HRH3Q9Y5N1 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HRH3Q9Y5N1 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HRH3Q9Y5N1 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HRH3Q9Y5N1 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
HRH3Q9Y5N1 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.3
HRH3Q9Y5N1 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC16.96■□□□□ 0.3
HRH3Q9Y5N1 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
HRH3Q9Y5N1 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC16.96■□□□□ 0.3
HRH3Q9Y5N1 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
HRH3Q9Y5N1 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
HRH3Q9Y5N1 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.3
HRH3Q9Y5N1 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
HRH3Q9Y5N1 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC16.96■□□□□ 0.3
HRH3Q9Y5N1 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
HRH3Q9Y5N1 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
HRH3Q9Y5N1 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.3
HRH3Q9Y5N1 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC16.95■□□□□ 0.3
HRH3Q9Y5N1 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
HRH3Q9Y5N1 AL031598.1-201ENST00000561511 1773 ntBASIC16.95■□□□□ 0.3
HRH3Q9Y5N1 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC16.95■□□□□ 0.3
HRH3Q9Y5N1 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
HRH3Q9Y5N1 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
HRH3Q9Y5N1 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HRH3Q9Y5N1 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HRH3Q9Y5N1 AC093525.10-201ENST00000625130 1569 ntBASIC16.95■□□□□ 0.3
HRH3Q9Y5N1 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
HRH3Q9Y5N1 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HRH3Q9Y5N1 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
HRH3Q9Y5N1 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
HRH3Q9Y5N1 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HRH3Q9Y5N1 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
HRH3Q9Y5N1 AP000523.1-201ENST00000398242 1049 ntBASIC16.95■□□□□ 0.3
HRH3Q9Y5N1 DAP-202ENST00000432074 1048 ntTSL 2 BASIC16.95■□□□□ 0.3
HRH3Q9Y5N1 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC16.95■□□□□ 0.3
HRH3Q9Y5N1 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC16.95■□□□□ 0.3
HRH3Q9Y5N1 LY6E-213ENST00000522528 606 ntTSL 3 BASIC16.95■□□□□ 0.3
HRH3Q9Y5N1 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
HRH3Q9Y5N1 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
HRH3Q9Y5N1 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC16.95■□□□□ 0.3
HRH3Q9Y5N1 NAT14-202ENST00000587400 416 ntTSL 5 BASIC16.95■□□□□ 0.3
HRH3Q9Y5N1 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC16.95■□□□□ 0.3
HRH3Q9Y5N1 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC16.95■□□□□ 0.3
HRH3Q9Y5N1 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
HRH3Q9Y5N1 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
HRH3Q9Y5N1 COBL-210ENST00000632460 1941 ntTSL 5 BASIC16.95■□□□□ 0.3
HRH3Q9Y5N1 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC16.95■□□□□ 0.3
HRH3Q9Y5N1 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HRH3Q9Y5N1 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
HRH3Q9Y5N1 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HRH3Q9Y5N1 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
HRH3Q9Y5N1 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
HRH3Q9Y5N1 KRT8P50-201ENST00000562022 1438 ntBASIC16.95■□□□□ 0.3
HRH3Q9Y5N1 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC16.95■□□□□ 0.3
HRH3Q9Y5N1 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HRH3Q9Y5N1 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
HRH3Q9Y5N1 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
HRH3Q9Y5N1 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC16.94■□□□□ 0.3
HRH3Q9Y5N1 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms