Protein–RNA interactions for Protein: Q9Y5G7

PCDHGA6, Protocadherin gamma-A6, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6Q9Y5G7 Z98044.1-201ENST00000632503 1764 ntBASIC17.71■□□□□ 0.43
PCDHGA6Q9Y5G7 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHGA6Q9Y5G7 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC17.71■□□□□ 0.43
PCDHGA6Q9Y5G7 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHGA6Q9Y5G7 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHGA6Q9Y5G7 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHGA6Q9Y5G7 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHGA6Q9Y5G7 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC17.71■□□□□ 0.43
PCDHGA6Q9Y5G7 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHGA6Q9Y5G7 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHGA6Q9Y5G7 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHGA6Q9Y5G7 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
PCDHGA6Q9Y5G7 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHGA6Q9Y5G7 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHGA6Q9Y5G7 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC17.71■□□□□ 0.43
PCDHGA6Q9Y5G7 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC17.71■□□□□ 0.43
PCDHGA6Q9Y5G7 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
PCDHGA6Q9Y5G7 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC17.71■□□□□ 0.43
PCDHGA6Q9Y5G7 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHGA6Q9Y5G7 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHGA6Q9Y5G7 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHGA6Q9Y5G7 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHGA6Q9Y5G7 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHGA6Q9Y5G7 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHGA6Q9Y5G7 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHGA6Q9Y5G7 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC17.71■□□□□ 0.42
PCDHGA6Q9Y5G7 GPAT2P1-201ENST00000444924 1672 ntBASIC17.71■□□□□ 0.42
PCDHGA6Q9Y5G7 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC17.71■□□□□ 0.42
PCDHGA6Q9Y5G7 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHGA6Q9Y5G7 USP39-202ENST00000409025 1946 ntTSL 5 BASIC17.7■□□□□ 0.42
PCDHGA6Q9Y5G7 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
PCDHGA6Q9Y5G7 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHGA6Q9Y5G7 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHGA6Q9Y5G7 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHGA6Q9Y5G7 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHGA6Q9Y5G7 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHGA6Q9Y5G7 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHGA6Q9Y5G7 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHGA6Q9Y5G7 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC17.7■□□□□ 0.42
PCDHGA6Q9Y5G7 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC17.7■□□□□ 0.42
PCDHGA6Q9Y5G7 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHGA6Q9Y5G7 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC17.7■□□□□ 0.42
PCDHGA6Q9Y5G7 CLEC4GP1-201ENST00000596555 870 ntBASIC17.7■□□□□ 0.42
PCDHGA6Q9Y5G7 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC17.7■□□□□ 0.42
PCDHGA6Q9Y5G7 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHGA6Q9Y5G7 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHGA6Q9Y5G7 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHGA6Q9Y5G7 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC17.7■□□□□ 0.42
PCDHGA6Q9Y5G7 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHGA6Q9Y5G7 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHGA6Q9Y5G7 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
PCDHGA6Q9Y5G7 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHGA6Q9Y5G7 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHGA6Q9Y5G7 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHGA6Q9Y5G7 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHGA6Q9Y5G7 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
PCDHGA6Q9Y5G7 GAS2L1P1-201ENST00000420145 1480 ntBASIC17.69■□□□□ 0.42
PCDHGA6Q9Y5G7 PCDHB18P-201ENST00000524813 2368 ntBASIC17.69■□□□□ 0.42
PCDHGA6Q9Y5G7 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHGA6Q9Y5G7 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
PCDHGA6Q9Y5G7 AL354751.1-201ENST00000412768 1863 ntBASIC17.69■□□□□ 0.42
PCDHGA6Q9Y5G7 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHGA6Q9Y5G7 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHGA6Q9Y5G7 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC17.69■□□□□ 0.42
PCDHGA6Q9Y5G7 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHGA6Q9Y5G7 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHGA6Q9Y5G7 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHGA6Q9Y5G7 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHGA6Q9Y5G7 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC17.69■□□□□ 0.42
PCDHGA6Q9Y5G7 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC17.69■□□□□ 0.42
PCDHGA6Q9Y5G7 AL023284.2-201ENST00000405850 579 ntBASIC17.69■□□□□ 0.42
PCDHGA6Q9Y5G7 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHGA6Q9Y5G7 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHGA6Q9Y5G7 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHGA6Q9Y5G7 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHGA6Q9Y5G7 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC17.69■□□□□ 0.42
PCDHGA6Q9Y5G7 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHGA6Q9Y5G7 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHGA6Q9Y5G7 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHGA6Q9Y5G7 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHGA6Q9Y5G7 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHGA6Q9Y5G7 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC17.68■□□□□ 0.42
PCDHGA6Q9Y5G7 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHGA6Q9Y5G7 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHGA6Q9Y5G7 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
PCDHGA6Q9Y5G7 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC17.68■□□□□ 0.42
PCDHGA6Q9Y5G7 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHGA6Q9Y5G7 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHGA6Q9Y5G7 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC17.68■□□□□ 0.42
PCDHGA6Q9Y5G7 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHGA6Q9Y5G7 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHGA6Q9Y5G7 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHGA6Q9Y5G7 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC17.68■□□□□ 0.42
PCDHGA6Q9Y5G7 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHGA6Q9Y5G7 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHGA6Q9Y5G7 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
PCDHGA6Q9Y5G7 AL645929.1-201ENST00000420084 975 ntBASIC17.68■□□□□ 0.42
PCDHGA6Q9Y5G7 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHGA6Q9Y5G7 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC17.68■□□□□ 0.42
PCDHGA6Q9Y5G7 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms