Protein–RNA interactions for Protein: Q9UMS6

SYNPO2, Synaptopodin-2, humanhuman

Predictions only

Length 1,093 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2Q9UMS6 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC21.09■□□□□ 0.97
SYNPO2Q9UMS6 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SYNPO2Q9UMS6 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SYNPO2Q9UMS6 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SYNPO2Q9UMS6 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
SYNPO2Q9UMS6 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SYNPO2Q9UMS6 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SYNPO2Q9UMS6 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SYNPO2Q9UMS6 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC21.09■□□□□ 0.97
SYNPO2Q9UMS6 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
SYNPO2Q9UMS6 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
SYNPO2Q9UMS6 AC005336.2-201ENST00000593183 939 ntBASIC21.09■□□□□ 0.97
SYNPO2Q9UMS6 AC138894.3-201ENST00000603787 634 ntBASIC21.09■□□□□ 0.97
SYNPO2Q9UMS6 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
SYNPO2Q9UMS6 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SYNPO2Q9UMS6 BX323043.1-201ENST00000641006 1765 ntBASIC21.09■□□□□ 0.97
SYNPO2Q9UMS6 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
SYNPO2Q9UMS6 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
SYNPO2Q9UMS6 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
SYNPO2Q9UMS6 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
SYNPO2Q9UMS6 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC21.09■□□□□ 0.97
SYNPO2Q9UMS6 LINC00602-201ENST00000629776 2065 ntBASIC21.09■□□□□ 0.97
SYNPO2Q9UMS6 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC21.09■□□□□ 0.97
SYNPO2Q9UMS6 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SYNPO2Q9UMS6 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SYNPO2Q9UMS6 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
SYNPO2Q9UMS6 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
SYNPO2Q9UMS6 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC21.09■□□□□ 0.97
SYNPO2Q9UMS6 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
SYNPO2Q9UMS6 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
SYNPO2Q9UMS6 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SYNPO2Q9UMS6 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
SYNPO2Q9UMS6 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SYNPO2Q9UMS6 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
SYNPO2Q9UMS6 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
SYNPO2Q9UMS6 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SYNPO2Q9UMS6 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
SYNPO2Q9UMS6 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
SYNPO2Q9UMS6 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SYNPO2Q9UMS6 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
SYNPO2Q9UMS6 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC21.08■□□□□ 0.97
SYNPO2Q9UMS6 BMF-207ENST00000559701 630 ntTSL 3 BASIC21.08■□□□□ 0.97
SYNPO2Q9UMS6 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SYNPO2Q9UMS6 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
SYNPO2Q9UMS6 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
SYNPO2Q9UMS6 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC21.08■□□□□ 0.96
SYNPO2Q9UMS6 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
SYNPO2Q9UMS6 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC21.08■□□□□ 0.96
SYNPO2Q9UMS6 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
SYNPO2Q9UMS6 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
SYNPO2Q9UMS6 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SYNPO2Q9UMS6 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SYNPO2Q9UMS6 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SYNPO2Q9UMS6 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
SYNPO2Q9UMS6 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
SYNPO2Q9UMS6 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC21.07■□□□□ 0.96
SYNPO2Q9UMS6 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SYNPO2Q9UMS6 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC21.07■□□□□ 0.96
SYNPO2Q9UMS6 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC21.07■□□□□ 0.96
SYNPO2Q9UMS6 AL138831.2-201ENST00000606564 490 ntBASIC21.07■□□□□ 0.96
SYNPO2Q9UMS6 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SYNPO2Q9UMS6 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SYNPO2Q9UMS6 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SYNPO2Q9UMS6 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC21.07■□□□□ 0.96
SYNPO2Q9UMS6 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC21.07■□□□□ 0.96
SYNPO2Q9UMS6 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC21.07■□□□□ 0.96
SYNPO2Q9UMS6 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC21.07■□□□□ 0.96
SYNPO2Q9UMS6 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
SYNPO2Q9UMS6 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC21.07■□□□□ 0.96
SYNPO2Q9UMS6 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
SYNPO2Q9UMS6 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
SYNPO2Q9UMS6 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SYNPO2Q9UMS6 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SYNPO2Q9UMS6 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SYNPO2Q9UMS6 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
SYNPO2Q9UMS6 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC21.06■□□□□ 0.96
SYNPO2Q9UMS6 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
SYNPO2Q9UMS6 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SYNPO2Q9UMS6 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC21.06■□□□□ 0.96
SYNPO2Q9UMS6 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SYNPO2Q9UMS6 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SYNPO2Q9UMS6 EMD-201ENST00000369835 966 ntTSL 3 BASIC21.06■□□□□ 0.96
SYNPO2Q9UMS6 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC21.06■□□□□ 0.96
SYNPO2Q9UMS6 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
SYNPO2Q9UMS6 AC009533.2-201ENST00000543664 586 ntBASIC21.06■□□□□ 0.96
SYNPO2Q9UMS6 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC21.06■□□□□ 0.96
SYNPO2Q9UMS6 REXO1L6P-202ENST00000619970 1078 ntBASIC21.06■□□□□ 0.96
SYNPO2Q9UMS6 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SYNPO2Q9UMS6 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
SYNPO2Q9UMS6 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC21.06■□□□□ 0.96
SYNPO2Q9UMS6 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SYNPO2Q9UMS6 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC21.06■□□□□ 0.96
SYNPO2Q9UMS6 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SYNPO2Q9UMS6 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
SYNPO2Q9UMS6 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
SYNPO2Q9UMS6 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SYNPO2Q9UMS6 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC21.06■□□□□ 0.96
SYNPO2Q9UMS6 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC21.06■□□□□ 0.96
SYNPO2Q9UMS6 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC21.05■□□□□ 0.96
SYNPO2Q9UMS6 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC21.05■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms