Protein–RNA interactions for Protein: Q9NZI7

UBP1, Upstream-binding protein 1, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBP1Q9NZI7 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC18.73■□□□□ 0.59
UBP1Q9NZI7 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
UBP1Q9NZI7 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC18.73■□□□□ 0.59
UBP1Q9NZI7 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
UBP1Q9NZI7 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC18.73■□□□□ 0.59
UBP1Q9NZI7 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
UBP1Q9NZI7 AC024243.1-201ENST00000609234 778 ntBASIC18.73■□□□□ 0.59
UBP1Q9NZI7 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC18.73■□□□□ 0.59
UBP1Q9NZI7 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
UBP1Q9NZI7 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC18.73■□□□□ 0.59
UBP1Q9NZI7 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
UBP1Q9NZI7 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
UBP1Q9NZI7 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
UBP1Q9NZI7 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
UBP1Q9NZI7 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
UBP1Q9NZI7 HOXB1-202ENST00000577092 1414 ntBASIC18.73■□□□□ 0.59
UBP1Q9NZI7 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
UBP1Q9NZI7 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
UBP1Q9NZI7 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
UBP1Q9NZI7 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC18.73■□□□□ 0.59
UBP1Q9NZI7 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
UBP1Q9NZI7 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
UBP1Q9NZI7 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC18.72■□□□□ 0.59
UBP1Q9NZI7 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
UBP1Q9NZI7 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
UBP1Q9NZI7 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
UBP1Q9NZI7 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
UBP1Q9NZI7 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC18.72■□□□□ 0.59
UBP1Q9NZI7 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
UBP1Q9NZI7 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
UBP1Q9NZI7 SLC25A3P1-201ENST00000443844 931 ntBASIC18.72■□□□□ 0.59
UBP1Q9NZI7 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC18.72■□□□□ 0.59
UBP1Q9NZI7 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC18.72■□□□□ 0.59
UBP1Q9NZI7 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
UBP1Q9NZI7 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC18.72■□□□□ 0.59
UBP1Q9NZI7 AL163051.1-201ENST00000569214 1512 ntBASIC18.72■□□□□ 0.59
UBP1Q9NZI7 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
UBP1Q9NZI7 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
UBP1Q9NZI7 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
UBP1Q9NZI7 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC18.72■□□□□ 0.59
UBP1Q9NZI7 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
UBP1Q9NZI7 UROS-202ENST00000368778 1556 ntTSL 2 BASIC18.72■□□□□ 0.59
UBP1Q9NZI7 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
UBP1Q9NZI7 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
UBP1Q9NZI7 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
UBP1Q9NZI7 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
UBP1Q9NZI7 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
UBP1Q9NZI7 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
UBP1Q9NZI7 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC18.71■□□□□ 0.59
UBP1Q9NZI7 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
UBP1Q9NZI7 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
UBP1Q9NZI7 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
UBP1Q9NZI7 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
UBP1Q9NZI7 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
UBP1Q9NZI7 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
UBP1Q9NZI7 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
UBP1Q9NZI7 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
UBP1Q9NZI7 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
UBP1Q9NZI7 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
UBP1Q9NZI7 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC18.71■□□□□ 0.59
UBP1Q9NZI7 AC211429.1-201ENST00000415277 523 ntBASIC18.71■□□□□ 0.59
UBP1Q9NZI7 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC18.71■□□□□ 0.59
UBP1Q9NZI7 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC18.71■□□□□ 0.59
UBP1Q9NZI7 AC010203.1-204ENST00000548782 407 ntBASIC18.71■□□□□ 0.59
UBP1Q9NZI7 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC18.71■□□□□ 0.59
UBP1Q9NZI7 GPX4-207ENST00000589115 812 ntTSL 2 BASIC18.71■□□□□ 0.59
UBP1Q9NZI7 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
UBP1Q9NZI7 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC18.71■□□□□ 0.59
UBP1Q9NZI7 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC18.71■□□□□ 0.59
UBP1Q9NZI7 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC18.71■□□□□ 0.59
UBP1Q9NZI7 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
UBP1Q9NZI7 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
UBP1Q9NZI7 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC18.71■□□□□ 0.59
UBP1Q9NZI7 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC18.71■□□□□ 0.59
UBP1Q9NZI7 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC18.71■□□□□ 0.59
UBP1Q9NZI7 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
UBP1Q9NZI7 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC18.71■□□□□ 0.58
UBP1Q9NZI7 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
UBP1Q9NZI7 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
UBP1Q9NZI7 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC18.7■□□□□ 0.58
UBP1Q9NZI7 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
UBP1Q9NZI7 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
UBP1Q9NZI7 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
UBP1Q9NZI7 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
UBP1Q9NZI7 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC18.7■□□□□ 0.58
UBP1Q9NZI7 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
UBP1Q9NZI7 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
UBP1Q9NZI7 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
UBP1Q9NZI7 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC18.7■□□□□ 0.58
UBP1Q9NZI7 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
UBP1Q9NZI7 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC18.7■□□□□ 0.58
UBP1Q9NZI7 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
UBP1Q9NZI7 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC18.7■□□□□ 0.58
UBP1Q9NZI7 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC18.7■□□□□ 0.58
UBP1Q9NZI7 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
UBP1Q9NZI7 SDHAP2-201ENST00000455183 2001 ntBASIC18.7■□□□□ 0.58
UBP1Q9NZI7 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC18.7■□□□□ 0.58
UBP1Q9NZI7 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
UBP1Q9NZI7 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC18.7■□□□□ 0.58
UBP1Q9NZI7 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC18.7■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms