Protein–RNA interactions for Protein: Q9C0I3

CCSER1, Serine-rich coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1Q9C0I3 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCSER1Q9C0I3 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC20.56■□□□□ 0.88
CCSER1Q9C0I3 CD81-212ENST00000526072 1172 ntTSL 5 BASIC20.56■□□□□ 0.88
CCSER1Q9C0I3 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC20.56■□□□□ 0.88
CCSER1Q9C0I3 GCSHP2-201ENST00000560971 527 ntBASIC20.56■□□□□ 0.88
CCSER1Q9C0I3 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
CCSER1Q9C0I3 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC20.56■□□□□ 0.88
CCSER1Q9C0I3 AC005363.2-201ENST00000618631 242 ntBASIC20.56■□□□□ 0.88
CCSER1Q9C0I3 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCSER1Q9C0I3 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CCSER1Q9C0I3 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
CCSER1Q9C0I3 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
CCSER1Q9C0I3 LGALS8-AS1-201ENST00000487567 1457 ntBASIC20.56■□□□□ 0.88
CCSER1Q9C0I3 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCSER1Q9C0I3 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCSER1Q9C0I3 CD276-201ENST00000318424 2738 ntTSL 5 BASIC20.55■□□□□ 0.88
CCSER1Q9C0I3 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC20.55■□□□□ 0.88
CCSER1Q9C0I3 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCSER1Q9C0I3 AC138028.4-201ENST00000564984 1845 ntBASIC20.55■□□□□ 0.88
CCSER1Q9C0I3 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC20.55■□□□□ 0.88
CCSER1Q9C0I3 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC20.55■□□□□ 0.88
CCSER1Q9C0I3 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC20.55■□□□□ 0.88
CCSER1Q9C0I3 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC20.55■□□□□ 0.88
CCSER1Q9C0I3 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC20.55■□□□□ 0.88
CCSER1Q9C0I3 TERF1P1-201ENST00000311003 1181 ntBASIC20.55■□□□□ 0.88
CCSER1Q9C0I3 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCSER1Q9C0I3 LIN28AP1-201ENST00000429574 405 ntBASIC20.55■□□□□ 0.88
CCSER1Q9C0I3 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC20.55■□□□□ 0.88
CCSER1Q9C0I3 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCSER1Q9C0I3 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC20.55■□□□□ 0.88
CCSER1Q9C0I3 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC20.55■□□□□ 0.88
CCSER1Q9C0I3 P4HB-223ENST00000576390 439 ntTSL 4 BASIC20.55■□□□□ 0.88
CCSER1Q9C0I3 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC20.55■□□□□ 0.88
CCSER1Q9C0I3 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCSER1Q9C0I3 AC093010.1-201ENST00000473625 1624 ntBASIC20.55■□□□□ 0.88
CCSER1Q9C0I3 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CCSER1Q9C0I3 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
CCSER1Q9C0I3 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCSER1Q9C0I3 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCSER1Q9C0I3 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC20.55■□□□□ 0.88
CCSER1Q9C0I3 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
CCSER1Q9C0I3 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC20.55■□□□□ 0.88
CCSER1Q9C0I3 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CCSER1Q9C0I3 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCSER1Q9C0I3 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCSER1Q9C0I3 NOC2LP2-201ENST00000407594 1944 ntBASIC20.55■□□□□ 0.88
CCSER1Q9C0I3 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
CCSER1Q9C0I3 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCSER1Q9C0I3 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC20.54■□□□□ 0.88
CCSER1Q9C0I3 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCSER1Q9C0I3 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CCSER1Q9C0I3 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CCSER1Q9C0I3 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCSER1Q9C0I3 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCSER1Q9C0I3 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC20.54■□□□□ 0.88
CCSER1Q9C0I3 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCSER1Q9C0I3 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
CCSER1Q9C0I3 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC20.54■□□□□ 0.88
CCSER1Q9C0I3 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCSER1Q9C0I3 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CCSER1Q9C0I3 PVRIG2P-201ENST00000435460 978 ntBASIC20.54■□□□□ 0.88
CCSER1Q9C0I3 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCSER1Q9C0I3 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC20.54■□□□□ 0.88
CCSER1Q9C0I3 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC20.54■□□□□ 0.88
CCSER1Q9C0I3 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC20.54■□□□□ 0.88
CCSER1Q9C0I3 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC20.54■□□□□ 0.88
CCSER1Q9C0I3 AL023973.1-201ENST00000624619 620 ntBASIC20.54■□□□□ 0.88
CCSER1Q9C0I3 AL157888.1-201ENST00000631930 593 ntBASIC20.54■□□□□ 0.88
CCSER1Q9C0I3 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCSER1Q9C0I3 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC20.54■□□□□ 0.88
CCSER1Q9C0I3 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CCSER1Q9C0I3 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCSER1Q9C0I3 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCSER1Q9C0I3 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC20.54■□□□□ 0.88
CCSER1Q9C0I3 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCSER1Q9C0I3 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCSER1Q9C0I3 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCSER1Q9C0I3 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
CCSER1Q9C0I3 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCSER1Q9C0I3 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC20.53■□□□□ 0.88
CCSER1Q9C0I3 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC20.53■□□□□ 0.88
CCSER1Q9C0I3 FLJ13224-201ENST00000313737 1514 ntBASIC20.53■□□□□ 0.88
CCSER1Q9C0I3 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC20.53■□□□□ 0.88
CCSER1Q9C0I3 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCSER1Q9C0I3 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
CCSER1Q9C0I3 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
CCSER1Q9C0I3 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCSER1Q9C0I3 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CCSER1Q9C0I3 AL137013.1-201ENST00000432946 1228 ntBASIC20.53■□□□□ 0.88
CCSER1Q9C0I3 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC20.53■□□□□ 0.88
CCSER1Q9C0I3 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC20.53■□□□□ 0.88
CCSER1Q9C0I3 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCSER1Q9C0I3 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC20.53■□□□□ 0.88
CCSER1Q9C0I3 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC20.53■□□□□ 0.88
CCSER1Q9C0I3 AL031432.5-201ENST00000641059 760 ntBASIC20.53■□□□□ 0.88
CCSER1Q9C0I3 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CCSER1Q9C0I3 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCSER1Q9C0I3 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC20.53■□□□□ 0.88
CCSER1Q9C0I3 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC20.53■□□□□ 0.88
CCSER1Q9C0I3 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms