Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
KRTAP3-3Q9BYR6 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
KRTAP3-3Q9BYR6 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
KRTAP3-3Q9BYR6 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
KRTAP3-3Q9BYR6 ABHD17AP4-201ENST00000411545 909 ntBASIC11.44□□□□□ -0.58
KRTAP3-3Q9BYR6 MTND1P21-201ENST00000412991 285 ntBASIC11.44□□□□□ -0.58
KRTAP3-3Q9BYR6 EIF4A1P13-201ENST00000415667 230 ntBASIC11.44□□□□□ -0.58
KRTAP3-3Q9BYR6 KCNE1-205ENST00000416357 796 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
KRTAP3-3Q9BYR6 IPPKP1-201ENST00000422501 768 ntBASIC11.44□□□□□ -0.58
KRTAP3-3Q9BYR6 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC11.44□□□□□ -0.58
KRTAP3-3Q9BYR6 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
KRTAP3-3Q9BYR6 AC098617.1-202ENST00000428980 1207 ntTSL 5 BASIC11.44□□□□□ -0.58
KRTAP3-3Q9BYR6 RNASE9-203ENST00000429244 1084 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
KRTAP3-3Q9BYR6 PDHX-202ENST00000430469 952 ntTSL 2 BASIC11.44□□□□□ -0.58
KRTAP3-3Q9BYR6 AC103563.6-201ENST00000432787 295 ntBASIC11.44□□□□□ -0.58
KRTAP3-3Q9BYR6 OR2B8P-201ENST00000432841 938 ntBASIC11.44□□□□□ -0.58
KRTAP3-3Q9BYR6 AC245047.1-201ENST00000433276 873 ntBASIC11.44□□□□□ -0.58
KRTAP3-3Q9BYR6 LINC00843-202ENST00000444438 550 ntTSL 5 BASIC11.44□□□□□ -0.58
KRTAP3-3Q9BYR6 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC11.44□□□□□ -0.58
KRTAP3-3Q9BYR6 EXOSC3P1-201ENST00000448649 500 ntBASIC11.44□□□□□ -0.58
KRTAP3-3Q9BYR6 AL133217.1-201ENST00000450980 425 ntBASIC11.44□□□□□ -0.58
KRTAP3-3Q9BYR6 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC11.44□□□□□ -0.58
KRTAP3-3Q9BYR6 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC11.44□□□□□ -0.58
KRTAP3-3Q9BYR6 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC11.44□□□□□ -0.58
KRTAP3-3Q9BYR6 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC11.44□□□□□ -0.58
KRTAP3-3Q9BYR6 SDHC-208ENST00000513009 369 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
KRTAP3-3Q9BYR6 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC11.44□□□□□ -0.58
KRTAP3-3Q9BYR6 MTCO1P49-201ENST00000523429 802 ntBASIC11.44□□□□□ -0.58
KRTAP3-3Q9BYR6 HNRNPRP2-201ENST00000528421 743 ntBASIC11.44□□□□□ -0.58
KRTAP3-3Q9BYR6 AC013457.1-201ENST00000556770 1011 ntTSL 3 BASIC11.44□□□□□ -0.58
KRTAP3-3Q9BYR6 NPM1P47-201ENST00000560843 856 ntBASIC11.44□□□□□ -0.58
KRTAP3-3Q9BYR6 NPTN-204ENST00000562924 1094 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
KRTAP3-3Q9BYR6 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC11.44□□□□□ -0.58
KRTAP3-3Q9BYR6 AC087761.1-201ENST00000568836 556 ntTSL 5 BASIC11.44□□□□□ -0.58
KRTAP3-3Q9BYR6 SNX11-210ENST00000582104 1282 ntTSL 2 BASIC11.44□□□□□ -0.58
KRTAP3-3Q9BYR6 AC091691.1-201ENST00000583587 1018 ntBASIC11.44□□□□□ -0.58
KRTAP3-3Q9BYR6 AP005265.1-201ENST00000584914 872 ntBASIC11.44□□□□□ -0.58
KRTAP3-3Q9BYR6 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC11.44□□□□□ -0.58
KRTAP3-3Q9BYR6 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC11.44□□□□□ -0.58
KRTAP3-3Q9BYR6 AL049840.5-201ENST00000602827 552 ntBASIC11.44□□□□□ -0.58
KRTAP3-3Q9BYR6 AL671309.1-201ENST00000603750 544 ntBASIC11.44□□□□□ -0.58
KRTAP3-3Q9BYR6 AL450489.1-201ENST00000612071 468 ntBASIC11.44□□□□□ -0.58
KRTAP3-3Q9BYR6 Metazoa_SRP.135-201ENST00000616324 269 ntBASIC11.44□□□□□ -0.58
KRTAP3-3Q9BYR6 AC006449.2-201ENST00000618407 486 ntTSL 2 BASIC11.44□□□□□ -0.58
KRTAP3-3Q9BYR6 AC073862.2-201ENST00000625114 701 ntBASIC11.44□□□□□ -0.58
KRTAP3-3Q9BYR6 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC11.44□□□□□ -0.58
KRTAP3-3Q9BYR6 FRG1EP-201ENST00000634469 770 ntBASIC11.44□□□□□ -0.58
KRTAP3-3Q9BYR6 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC11.44□□□□□ -0.58
KRTAP3-3Q9BYR6 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
KRTAP3-3Q9BYR6 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
KRTAP3-3Q9BYR6 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
KRTAP3-3Q9BYR6 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
KRTAP3-3Q9BYR6 AC079834.2-201ENST00000609776 1949 ntBASIC11.44□□□□□ -0.58
KRTAP3-3Q9BYR6 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
KRTAP3-3Q9BYR6 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
KRTAP3-3Q9BYR6 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
KRTAP3-3Q9BYR6 CAMK2D-208ENST00000508738 1470 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
KRTAP3-3Q9BYR6 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
KRTAP3-3Q9BYR6 LINC00167-201ENST00000530583 1419 ntBASIC11.43□□□□□ -0.58
KRTAP3-3Q9BYR6 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
KRTAP3-3Q9BYR6 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
KRTAP3-3Q9BYR6 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
KRTAP3-3Q9BYR6 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
KRTAP3-3Q9BYR6 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC11.43□□□□□ -0.58
KRTAP3-3Q9BYR6 AADAC-201ENST00000232892 1642 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
KRTAP3-3Q9BYR6 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC11.43□□□□□ -0.58
KRTAP3-3Q9BYR6 EIF3EP1-201ENST00000433978 1316 ntBASIC11.43□□□□□ -0.58
KRTAP3-3Q9BYR6 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC11.43□□□□□ -0.58
KRTAP3-3Q9BYR6 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
KRTAP3-3Q9BYR6 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
KRTAP3-3Q9BYR6 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
KRTAP3-3Q9BYR6 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
KRTAP3-3Q9BYR6 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
KRTAP3-3Q9BYR6 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC11.43□□□□□ -0.58
KRTAP3-3Q9BYR6 HNRNPA1P32-201ENST00000396326 963 ntBASIC11.43□□□□□ -0.58
KRTAP3-3Q9BYR6 HNRNPA1P58-201ENST00000403629 610 ntBASIC11.43□□□□□ -0.58
KRTAP3-3Q9BYR6 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
KRTAP3-3Q9BYR6 AL390955.1-201ENST00000428694 934 ntBASIC11.43□□□□□ -0.58
KRTAP3-3Q9BYR6 PTPN2P2-201ENST00000433704 1024 ntBASIC11.43□□□□□ -0.58
KRTAP3-3Q9BYR6 CR769776.1-201ENST00000441254 787 ntBASIC11.43□□□□□ -0.58
KRTAP3-3Q9BYR6 AL360221.1-201ENST00000445989 335 ntBASIC11.43□□□□□ -0.58
KRTAP3-3Q9BYR6 VN1R32P-201ENST00000452234 905 ntBASIC11.43□□□□□ -0.58
KRTAP3-3Q9BYR6 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
KRTAP3-3Q9BYR6 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC11.43□□□□□ -0.58
KRTAP3-3Q9BYR6 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC11.43□□□□□ -0.58
KRTAP3-3Q9BYR6 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC11.43□□□□□ -0.58
KRTAP3-3Q9BYR6 AC067942.2-201ENST00000506227 1268 ntBASIC11.43□□□□□ -0.58
KRTAP3-3Q9BYR6 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC11.43□□□□□ -0.58
KRTAP3-3Q9BYR6 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC11.43□□□□□ -0.58
KRTAP3-3Q9BYR6 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC11.43□□□□□ -0.58
KRTAP3-3Q9BYR6 RAP1B-230ENST00000543697 734 ntTSL 3 BASIC11.43□□□□□ -0.58
KRTAP3-3Q9BYR6 AC123904.3-201ENST00000547218 814 ntBASIC11.43□□□□□ -0.58
KRTAP3-3Q9BYR6 C12orf73-206ENST00000547975 1243 ntTSL 3 BASIC11.43□□□□□ -0.58
KRTAP3-3Q9BYR6 IFI27L1-203ENST00000553664 647 ntTSL 5 BASIC11.43□□□□□ -0.58
KRTAP3-3Q9BYR6 AC020659.1-202ENST00000564432 531 ntTSL 5 BASIC11.43□□□□□ -0.58
KRTAP3-3Q9BYR6 LINC00556-201ENST00000569603 412 ntBASIC11.43□□□□□ -0.58
KRTAP3-3Q9BYR6 EIF1P4-201ENST00000572664 335 ntBASIC11.43□□□□□ -0.58
KRTAP3-3Q9BYR6 AC023983.1-201ENST00000579347 567 ntTSL 5 BASIC11.43□□□□□ -0.58
KRTAP3-3Q9BYR6 AC092296.2-201ENST00000589470 999 ntBASIC11.43□□□□□ -0.58
KRTAP3-3Q9BYR6 VIS1.1-201ENST00000610517 203 ntBASIC11.43□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms