Protein–RNA interactions for Protein: Q9BQW3

EBF4, Transcription factor COE4, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF4Q9BQW3 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
EBF4Q9BQW3 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
EBF4Q9BQW3 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
EBF4Q9BQW3 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
EBF4Q9BQW3 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC17.93■□□□□ 0.46
EBF4Q9BQW3 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
EBF4Q9BQW3 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
EBF4Q9BQW3 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC17.93■□□□□ 0.46
EBF4Q9BQW3 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC17.93■□□□□ 0.46
EBF4Q9BQW3 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC17.93■□□□□ 0.46
EBF4Q9BQW3 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC17.93■□□□□ 0.46
EBF4Q9BQW3 GAMT-205ENST00000640762 751 ntTSL 5 BASIC17.93■□□□□ 0.46
EBF4Q9BQW3 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
EBF4Q9BQW3 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
EBF4Q9BQW3 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
EBF4Q9BQW3 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
EBF4Q9BQW3 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC17.93■□□□□ 0.46
EBF4Q9BQW3 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
EBF4Q9BQW3 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
EBF4Q9BQW3 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC17.93■□□□□ 0.46
EBF4Q9BQW3 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
EBF4Q9BQW3 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
EBF4Q9BQW3 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
EBF4Q9BQW3 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC17.92■□□□□ 0.46
EBF4Q9BQW3 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
EBF4Q9BQW3 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.92■□□□□ 0.46
EBF4Q9BQW3 AD000864.1-201ENST00000624076 2295 ntBASIC17.92■□□□□ 0.46
EBF4Q9BQW3 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
EBF4Q9BQW3 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
EBF4Q9BQW3 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC17.92■□□□□ 0.46
EBF4Q9BQW3 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC17.92■□□□□ 0.46
EBF4Q9BQW3 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
EBF4Q9BQW3 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC17.92■□□□□ 0.46
EBF4Q9BQW3 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC17.92■□□□□ 0.46
EBF4Q9BQW3 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC17.92■□□□□ 0.46
EBF4Q9BQW3 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC17.92■□□□□ 0.46
EBF4Q9BQW3 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC17.92■□□□□ 0.46
EBF4Q9BQW3 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
EBF4Q9BQW3 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC17.92■□□□□ 0.46
EBF4Q9BQW3 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC17.92■□□□□ 0.46
EBF4Q9BQW3 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC17.92■□□□□ 0.46
EBF4Q9BQW3 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
EBF4Q9BQW3 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC17.92■□□□□ 0.46
EBF4Q9BQW3 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC17.92■□□□□ 0.46
EBF4Q9BQW3 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
EBF4Q9BQW3 TNRC18P3-201ENST00000441896 2691 ntBASIC17.92■□□□□ 0.46
EBF4Q9BQW3 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC17.92■□□□□ 0.46
EBF4Q9BQW3 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
EBF4Q9BQW3 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC17.91■□□□□ 0.46
EBF4Q9BQW3 GMCL1P1-201ENST00000463439 1581 ntBASIC17.91■□□□□ 0.46
EBF4Q9BQW3 HARS-201ENST00000307633 1780 ntTSL 2 BASIC17.91■□□□□ 0.46
EBF4Q9BQW3 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
EBF4Q9BQW3 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
EBF4Q9BQW3 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
EBF4Q9BQW3 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
EBF4Q9BQW3 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
EBF4Q9BQW3 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC17.91■□□□□ 0.46
EBF4Q9BQW3 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
EBF4Q9BQW3 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
EBF4Q9BQW3 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
EBF4Q9BQW3 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC17.91■□□□□ 0.46
EBF4Q9BQW3 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
EBF4Q9BQW3 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
EBF4Q9BQW3 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC17.91■□□□□ 0.46
EBF4Q9BQW3 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
EBF4Q9BQW3 DERL1-203ENST00000419562 918 ntTSL 2 BASIC17.91■□□□□ 0.46
EBF4Q9BQW3 AC004980.1-204ENST00000429707 299 ntBASIC17.91■□□□□ 0.46
EBF4Q9BQW3 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC17.91■□□□□ 0.46
EBF4Q9BQW3 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC17.91■□□□□ 0.46
EBF4Q9BQW3 AC008403.3-201ENST00000598924 454 ntBASIC17.91■□□□□ 0.46
EBF4Q9BQW3 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC17.91■□□□□ 0.46
EBF4Q9BQW3 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
EBF4Q9BQW3 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
EBF4Q9BQW3 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
EBF4Q9BQW3 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC17.91■□□□□ 0.46
EBF4Q9BQW3 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
EBF4Q9BQW3 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
EBF4Q9BQW3 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
EBF4Q9BQW3 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC17.9■□□□□ 0.46
EBF4Q9BQW3 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC17.9■□□□□ 0.46
EBF4Q9BQW3 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC17.9■□□□□ 0.46
EBF4Q9BQW3 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
EBF4Q9BQW3 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
EBF4Q9BQW3 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC17.9■□□□□ 0.46
EBF4Q9BQW3 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
EBF4Q9BQW3 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
EBF4Q9BQW3 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
EBF4Q9BQW3 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
EBF4Q9BQW3 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
EBF4Q9BQW3 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
EBF4Q9BQW3 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
EBF4Q9BQW3 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
EBF4Q9BQW3 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
EBF4Q9BQW3 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
EBF4Q9BQW3 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
EBF4Q9BQW3 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
EBF4Q9BQW3 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
EBF4Q9BQW3 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
EBF4Q9BQW3 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
EBF4Q9BQW3 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 88.5 ms