Protein–RNA interactions for Protein: Q96NG5

ZNF558, Zinc finger protein 558, humanhuman

Predictions only

Length 402 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558Q96NG5 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ZNF558Q96NG5 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC19.49■□□□□ 0.71
ZNF558Q96NG5 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ZNF558Q96NG5 AC068472.1-201ENST00000474589 881 ntBASIC19.49■□□□□ 0.71
ZNF558Q96NG5 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC19.49■□□□□ 0.71
ZNF558Q96NG5 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
ZNF558Q96NG5 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC19.49■□□□□ 0.71
ZNF558Q96NG5 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC19.49■□□□□ 0.71
ZNF558Q96NG5 AC117500.6-201ENST00000624871 588 ntBASIC19.49■□□□□ 0.71
ZNF558Q96NG5 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ZNF558Q96NG5 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
ZNF558Q96NG5 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
ZNF558Q96NG5 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ZNF558Q96NG5 NARF-204ENST00000390006 1766 ntTSL 2 BASIC19.49■□□□□ 0.71
ZNF558Q96NG5 AC112777.1-201ENST00000540175 1423 ntBASIC19.49■□□□□ 0.71
ZNF558Q96NG5 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
ZNF558Q96NG5 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
ZNF558Q96NG5 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ZNF558Q96NG5 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
ZNF558Q96NG5 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ZNF558Q96NG5 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ZNF558Q96NG5 MYLKP1-201ENST00000509077 1580 ntBASIC19.49■□□□□ 0.71
ZNF558Q96NG5 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ZNF558Q96NG5 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC19.48■□□□□ 0.71
ZNF558Q96NG5 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
ZNF558Q96NG5 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
ZNF558Q96NG5 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ZNF558Q96NG5 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC19.48■□□□□ 0.71
ZNF558Q96NG5 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
ZNF558Q96NG5 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC19.48■□□□□ 0.71
ZNF558Q96NG5 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ZNF558Q96NG5 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
ZNF558Q96NG5 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ZNF558Q96NG5 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
ZNF558Q96NG5 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ZNF558Q96NG5 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC19.48■□□□□ 0.71
ZNF558Q96NG5 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
ZNF558Q96NG5 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
ZNF558Q96NG5 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
ZNF558Q96NG5 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
ZNF558Q96NG5 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC19.48■□□□□ 0.71
ZNF558Q96NG5 AC148477.8-201ENST00000624298 468 ntBASIC19.48■□□□□ 0.71
ZNF558Q96NG5 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
ZNF558Q96NG5 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
ZNF558Q96NG5 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ZNF558Q96NG5 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC19.48■□□□□ 0.71
ZNF558Q96NG5 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
ZNF558Q96NG5 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC19.48■□□□□ 0.71
ZNF558Q96NG5 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
ZNF558Q96NG5 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
ZNF558Q96NG5 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ZNF558Q96NG5 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ZNF558Q96NG5 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC19.47■□□□□ 0.71
ZNF558Q96NG5 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ZNF558Q96NG5 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
ZNF558Q96NG5 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ZNF558Q96NG5 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC19.47■□□□□ 0.71
ZNF558Q96NG5 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC19.47■□□□□ 0.71
ZNF558Q96NG5 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
ZNF558Q96NG5 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC19.47■□□□□ 0.71
ZNF558Q96NG5 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC19.47■□□□□ 0.71
ZNF558Q96NG5 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC19.47■□□□□ 0.71
ZNF558Q96NG5 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC19.47■□□□□ 0.71
ZNF558Q96NG5 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
ZNF558Q96NG5 AL355877.3-201ENST00000622820 899 ntBASIC19.47■□□□□ 0.71
ZNF558Q96NG5 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC19.47■□□□□ 0.71
ZNF558Q96NG5 AL024508.2-201ENST00000607749 1894 ntBASIC19.47■□□□□ 0.71
ZNF558Q96NG5 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.47■□□□□ 0.71
ZNF558Q96NG5 SDHAP2-201ENST00000455183 2001 ntBASIC19.47■□□□□ 0.71
ZNF558Q96NG5 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ZNF558Q96NG5 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
ZNF558Q96NG5 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ZNF558Q96NG5 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ZNF558Q96NG5 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
ZNF558Q96NG5 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
ZNF558Q96NG5 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ZNF558Q96NG5 AC099343.3-201ENST00000605834 2503 ntBASIC19.47■□□□□ 0.71
ZNF558Q96NG5 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
ZNF558Q96NG5 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ZNF558Q96NG5 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
ZNF558Q96NG5 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC19.46■□□□□ 0.71
ZNF558Q96NG5 MIR574-201ENST00000385209 96 ntBASIC19.46■□□□□ 0.71
ZNF558Q96NG5 HIST2H3DP1-201ENST00000401004 416 ntBASIC19.46■□□□□ 0.71
ZNF558Q96NG5 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC19.46■□□□□ 0.71
ZNF558Q96NG5 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC19.46■□□□□ 0.71
ZNF558Q96NG5 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC19.46■□□□□ 0.71
ZNF558Q96NG5 AC073648.2-201ENST00000510116 352 ntBASIC19.46■□□□□ 0.71
ZNF558Q96NG5 AC009533.2-201ENST00000543664 586 ntBASIC19.46■□□□□ 0.71
ZNF558Q96NG5 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
ZNF558Q96NG5 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC19.46■□□□□ 0.71
ZNF558Q96NG5 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ZNF558Q96NG5 AC009154.2-201ENST00000621177 724 ntBASIC19.46■□□□□ 0.71
ZNF558Q96NG5 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC19.46■□□□□ 0.71
ZNF558Q96NG5 AFG3L1P-217ENST00000557444 2447 ntBASIC19.46■□□□□ 0.71
ZNF558Q96NG5 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ZNF558Q96NG5 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
ZNF558Q96NG5 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC19.46■□□□□ 0.71
ZNF558Q96NG5 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC19.46■□□□□ 0.71
ZNF558Q96NG5 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
ZNF558Q96NG5 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms