Protein–RNA interactions for Protein: Q96FZ7

CHMP6, Charged multivesicular body protein 6, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6Q96FZ7 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC18.52■□□□□ 0.56
CHMP6Q96FZ7 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CHMP6Q96FZ7 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
CHMP6Q96FZ7 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CHMP6Q96FZ7 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
CHMP6Q96FZ7 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
CHMP6Q96FZ7 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CHMP6Q96FZ7 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
CHMP6Q96FZ7 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
CHMP6Q96FZ7 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
CHMP6Q96FZ7 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CHMP6Q96FZ7 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC18.52■□□□□ 0.56
CHMP6Q96FZ7 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CHMP6Q96FZ7 TSPY23P-201ENST00000440136 739 ntBASIC18.52■□□□□ 0.56
CHMP6Q96FZ7 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CHMP6Q96FZ7 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC18.52■□□□□ 0.56
CHMP6Q96FZ7 TK2-208ENST00000545043 1120 ntTSL 2 BASIC18.52■□□□□ 0.56
CHMP6Q96FZ7 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC18.52■□□□□ 0.56
CHMP6Q96FZ7 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.56
CHMP6Q96FZ7 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC18.52■□□□□ 0.56
CHMP6Q96FZ7 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC18.52■□□□□ 0.56
CHMP6Q96FZ7 HLA-DQB1-201ENST00000374943 1656 ntBASIC18.52■□□□□ 0.56
CHMP6Q96FZ7 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC18.52■□□□□ 0.55
CHMP6Q96FZ7 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC18.52■□□□□ 0.55
CHMP6Q96FZ7 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CHMP6Q96FZ7 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.55
CHMP6Q96FZ7 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CHMP6Q96FZ7 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CHMP6Q96FZ7 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC18.51■□□□□ 0.55
CHMP6Q96FZ7 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CHMP6Q96FZ7 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CHMP6Q96FZ7 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CHMP6Q96FZ7 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC18.51■□□□□ 0.55
CHMP6Q96FZ7 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CHMP6Q96FZ7 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC18.51■□□□□ 0.55
CHMP6Q96FZ7 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
CHMP6Q96FZ7 AC073210.2-201ENST00000430369 194 ntBASIC18.51■□□□□ 0.55
CHMP6Q96FZ7 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC18.51■□□□□ 0.55
CHMP6Q96FZ7 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CHMP6Q96FZ7 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC18.51■□□□□ 0.55
CHMP6Q96FZ7 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC18.51■□□□□ 0.55
CHMP6Q96FZ7 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CHMP6Q96FZ7 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC18.51■□□□□ 0.55
CHMP6Q96FZ7 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC18.51■□□□□ 0.55
CHMP6Q96FZ7 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CHMP6Q96FZ7 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC18.51■□□□□ 0.55
CHMP6Q96FZ7 CRK-204ENST00000574295 1391 ntTSL 5 BASIC18.51■□□□□ 0.55
CHMP6Q96FZ7 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CHMP6Q96FZ7 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CHMP6Q96FZ7 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CHMP6Q96FZ7 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CHMP6Q96FZ7 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CHMP6Q96FZ7 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CHMP6Q96FZ7 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CHMP6Q96FZ7 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CHMP6Q96FZ7 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CHMP6Q96FZ7 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CHMP6Q96FZ7 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC18.5■□□□□ 0.55
CHMP6Q96FZ7 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CHMP6Q96FZ7 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC18.5■□□□□ 0.55
CHMP6Q96FZ7 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC18.5■□□□□ 0.55
CHMP6Q96FZ7 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CHMP6Q96FZ7 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CHMP6Q96FZ7 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC18.5■□□□□ 0.55
CHMP6Q96FZ7 KRT8P45-201ENST00000414328 1447 ntBASIC18.5■□□□□ 0.55
CHMP6Q96FZ7 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CHMP6Q96FZ7 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CHMP6Q96FZ7 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC18.5■□□□□ 0.55
CHMP6Q96FZ7 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CHMP6Q96FZ7 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC18.5■□□□□ 0.55
CHMP6Q96FZ7 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
CHMP6Q96FZ7 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
CHMP6Q96FZ7 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
CHMP6Q96FZ7 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
CHMP6Q96FZ7 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC18.5■□□□□ 0.55
CHMP6Q96FZ7 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CHMP6Q96FZ7 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
CHMP6Q96FZ7 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC18.5■□□□□ 0.55
CHMP6Q96FZ7 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CHMP6Q96FZ7 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC18.5■□□□□ 0.55
CHMP6Q96FZ7 NCF1B-203ENST00000435988 1254 ntBASIC18.5■□□□□ 0.55
CHMP6Q96FZ7 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
CHMP6Q96FZ7 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC18.5■□□□□ 0.55
CHMP6Q96FZ7 NME6-213ENST00000451657 871 ntTSL 2 BASIC18.5■□□□□ 0.55
CHMP6Q96FZ7 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CHMP6Q96FZ7 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC18.5■□□□□ 0.55
CHMP6Q96FZ7 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CHMP6Q96FZ7 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CHMP6Q96FZ7 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CHMP6Q96FZ7 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC18.5■□□□□ 0.55
CHMP6Q96FZ7 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CHMP6Q96FZ7 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CHMP6Q96FZ7 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC18.5■□□□□ 0.55
CHMP6Q96FZ7 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CHMP6Q96FZ7 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CHMP6Q96FZ7 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CHMP6Q96FZ7 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CHMP6Q96FZ7 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CHMP6Q96FZ7 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC18.49■□□□□ 0.55
CHMP6Q96FZ7 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms