Protein–RNA interactions for Protein: Q96DI7

SNRNP40, U5 small nuclear ribonucleoprotein 40 kDa protein, humanhuman

Known RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40Q96DI7 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
SNRNP40Q96DI7 AC141586.3-201ENST00000562166 1838 ntBASIC16.5■□□□□ 0.23
SNRNP40Q96DI7 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC16.5■□□□□ 0.23
SNRNP40Q96DI7 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SNRNP40Q96DI7 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
SNRNP40Q96DI7 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SNRNP40Q96DI7 CCS-201ENST00000310190 942 ntTSL 5 BASIC16.5■□□□□ 0.23
SNRNP40Q96DI7 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
SNRNP40Q96DI7 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC16.5■□□□□ 0.23
SNRNP40Q96DI7 COX10-202ENST00000429152 875 ntTSL 2 BASIC16.5■□□□□ 0.23
SNRNP40Q96DI7 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
SNRNP40Q96DI7 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC16.5■□□□□ 0.23
SNRNP40Q96DI7 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SNRNP40Q96DI7 FAM215A-202ENST00000632077 792 ntBASIC16.5■□□□□ 0.23
SNRNP40Q96DI7 ANKRD20A8P-203ENST00000641373 517 ntBASIC16.5■□□□□ 0.23
SNRNP40Q96DI7 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SNRNP40Q96DI7 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
SNRNP40Q96DI7 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
SNRNP40Q96DI7 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SNRNP40Q96DI7 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SNRNP40Q96DI7 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
SNRNP40Q96DI7 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SNRNP40Q96DI7 AC125437.2-201ENST00000625180 2167 ntBASIC16.5■□□□□ 0.23
SNRNP40Q96DI7 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SNRNP40Q96DI7 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SNRNP40Q96DI7 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC16.5■□□□□ 0.23
SNRNP40Q96DI7 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SNRNP40Q96DI7 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SNRNP40Q96DI7 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC16.49■□□□□ 0.23
SNRNP40Q96DI7 TP73-AS1-210ENST00000637775 1455 ntBASIC16.49■□□□□ 0.23
SNRNP40Q96DI7 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
SNRNP40Q96DI7 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SNRNP40Q96DI7 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SNRNP40Q96DI7 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
SNRNP40Q96DI7 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC16.49■□□□□ 0.23
SNRNP40Q96DI7 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
SNRNP40Q96DI7 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SNRNP40Q96DI7 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SNRNP40Q96DI7 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SNRNP40Q96DI7 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC16.49■□□□□ 0.23
SNRNP40Q96DI7 FGFR3P6-201ENST00000457012 610 ntBASIC16.49■□□□□ 0.23
SNRNP40Q96DI7 SCARNA2-201ENST00000458748 420 ntBASIC16.49■□□□□ 0.23
SNRNP40Q96DI7 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
SNRNP40Q96DI7 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC16.49■□□□□ 0.23
SNRNP40Q96DI7 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC16.49■□□□□ 0.23
SNRNP40Q96DI7 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
SNRNP40Q96DI7 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC16.49■□□□□ 0.23
SNRNP40Q96DI7 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC16.49■□□□□ 0.23
SNRNP40Q96DI7 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC16.49■□□□□ 0.23
SNRNP40Q96DI7 MTDHP3-201ENST00000594186 672 ntBASIC16.49■□□□□ 0.23
SNRNP40Q96DI7 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SNRNP40Q96DI7 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SNRNP40Q96DI7 AC116407.3-201ENST00000623905 1129 ntBASIC16.49■□□□□ 0.23
SNRNP40Q96DI7 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC16.49■□□□□ 0.23
SNRNP40Q96DI7 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SNRNP40Q96DI7 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SNRNP40Q96DI7 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
SNRNP40Q96DI7 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC16.49■□□□□ 0.23
SNRNP40Q96DI7 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SNRNP40Q96DI7 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SNRNP40Q96DI7 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
SNRNP40Q96DI7 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SNRNP40Q96DI7 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SNRNP40Q96DI7 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
SNRNP40Q96DI7 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC16.48■□□□□ 0.23
SNRNP40Q96DI7 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC16.48■□□□□ 0.23
SNRNP40Q96DI7 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
SNRNP40Q96DI7 AC138932.1-201ENST00000534164 6830 ntBASIC16.48■□□□□ 0.23
SNRNP40Q96DI7 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC16.48■□□□□ 0.23
SNRNP40Q96DI7 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SNRNP40Q96DI7 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SNRNP40Q96DI7 MED16-201ENST00000269814 1199 ntTSL 5 BASIC16.48■□□□□ 0.23
SNRNP40Q96DI7 RPS2P28-201ENST00000314255 741 ntBASIC16.48■□□□□ 0.23
SNRNP40Q96DI7 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
SNRNP40Q96DI7 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SNRNP40Q96DI7 FAM220CP-201ENST00000395253 831 ntBASIC16.48■□□□□ 0.23
SNRNP40Q96DI7 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC16.48■□□□□ 0.23
SNRNP40Q96DI7 HNRNPDP1-201ENST00000439535 754 ntBASIC16.48■□□□□ 0.23
SNRNP40Q96DI7 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC16.48■□□□□ 0.23
SNRNP40Q96DI7 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC16.48■□□□□ 0.23
SNRNP40Q96DI7 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC16.48■□□□□ 0.23
SNRNP40Q96DI7 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
SNRNP40Q96DI7 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
SNRNP40Q96DI7 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SNRNP40Q96DI7 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC16.48■□□□□ 0.23
SNRNP40Q96DI7 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC16.48■□□□□ 0.23
SNRNP40Q96DI7 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
SNRNP40Q96DI7 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SNRNP40Q96DI7 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
SNRNP40Q96DI7 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SNRNP40Q96DI7 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC16.47■□□□□ 0.23
SNRNP40Q96DI7 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SNRNP40Q96DI7 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
SNRNP40Q96DI7 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC16.47■□□□□ 0.23
SNRNP40Q96DI7 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC16.47■□□□□ 0.23
SNRNP40Q96DI7 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SNRNP40Q96DI7 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SNRNP40Q96DI7 HEIH-201ENST00000623091 1652 ntBASIC16.47■□□□□ 0.23
SNRNP40Q96DI7 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC16.47■□□□□ 0.23
SNRNP40Q96DI7 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms