Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
PTCD2Q8WV60 AC009947.2-201ENST00000444014 672 ntBASIC18.61■□□□□ 0.57
PTCD2Q8WV60 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
PTCD2Q8WV60 COX11P1-201ENST00000489116 835 ntBASIC18.61■□□□□ 0.57
PTCD2Q8WV60 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC18.61■□□□□ 0.57
PTCD2Q8WV60 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PTCD2Q8WV60 AL441883.1-201ENST00000566170 1045 ntBASIC18.61■□□□□ 0.57
PTCD2Q8WV60 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PTCD2Q8WV60 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC18.61■□□□□ 0.57
PTCD2Q8WV60 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC18.61■□□□□ 0.57
PTCD2Q8WV60 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC18.61■□□□□ 0.57
PTCD2Q8WV60 NOC2LP1-202ENST00000452600 2235 ntBASIC18.61■□□□□ 0.57
PTCD2Q8WV60 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
PTCD2Q8WV60 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PTCD2Q8WV60 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PTCD2Q8WV60 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PTCD2Q8WV60 AC036111.1-201ENST00000533973 1582 ntBASIC18.6■□□□□ 0.57
PTCD2Q8WV60 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PTCD2Q8WV60 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
PTCD2Q8WV60 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PTCD2Q8WV60 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PTCD2Q8WV60 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC18.6■□□□□ 0.57
PTCD2Q8WV60 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC18.6■□□□□ 0.57
PTCD2Q8WV60 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC18.6■□□□□ 0.57
PTCD2Q8WV60 AC019205.2-201ENST00000442007 1083 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PTCD2Q8WV60 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC18.6■□□□□ 0.57
PTCD2Q8WV60 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC18.6■□□□□ 0.57
PTCD2Q8WV60 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC18.6■□□□□ 0.57
PTCD2Q8WV60 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC18.6■□□□□ 0.57
PTCD2Q8WV60 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
PTCD2Q8WV60 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PTCD2Q8WV60 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC18.6■□□□□ 0.57
PTCD2Q8WV60 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC18.6■□□□□ 0.57
PTCD2Q8WV60 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PTCD2Q8WV60 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
PTCD2Q8WV60 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PTCD2Q8WV60 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
PTCD2Q8WV60 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PTCD2Q8WV60 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC18.59■□□□□ 0.57
PTCD2Q8WV60 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PTCD2Q8WV60 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PTCD2Q8WV60 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PTCD2Q8WV60 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC18.59■□□□□ 0.57
PTCD2Q8WV60 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC18.59■□□□□ 0.57
PTCD2Q8WV60 AC093677.2-201ENST00000600169 1863 ntBASIC18.59■□□□□ 0.57
PTCD2Q8WV60 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
PTCD2Q8WV60 FMC1-201ENST00000297534 1210 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PTCD2Q8WV60 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PTCD2Q8WV60 ARMC10P1-201ENST00000313754 855 ntBASIC18.59■□□□□ 0.57
PTCD2Q8WV60 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
PTCD2Q8WV60 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
PTCD2Q8WV60 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC18.59■□□□□ 0.57
PTCD2Q8WV60 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC18.59■□□□□ 0.57
PTCD2Q8WV60 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PTCD2Q8WV60 PHB2-202ENST00000440277 996 ntTSL 5 BASIC18.59■□□□□ 0.57
PTCD2Q8WV60 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC18.59■□□□□ 0.57
PTCD2Q8WV60 AC063952.2-201ENST00000498792 1227 ntBASIC18.59■□□□□ 0.57
PTCD2Q8WV60 AC084866.2-201ENST00000509956 449 ntTSL 2 BASIC18.59■□□□□ 0.57
PTCD2Q8WV60 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PTCD2Q8WV60 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC18.59■□□□□ 0.57
PTCD2Q8WV60 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PTCD2Q8WV60 AL590326.2-201ENST00000625139 305 ntBASIC18.59■□□□□ 0.57
PTCD2Q8WV60 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC18.59■□□□□ 0.57
PTCD2Q8WV60 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC18.59■□□□□ 0.57
PTCD2Q8WV60 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PTCD2Q8WV60 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PTCD2Q8WV60 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC18.59■□□□□ 0.57
PTCD2Q8WV60 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC18.59■□□□□ 0.57
PTCD2Q8WV60 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
PTCD2Q8WV60 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PTCD2Q8WV60 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC18.59■□□□□ 0.57
PTCD2Q8WV60 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PTCD2Q8WV60 CYP51A1P1-201ENST00000492267 1507 ntBASIC18.59■□□□□ 0.57
PTCD2Q8WV60 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC18.59■□□□□ 0.57
PTCD2Q8WV60 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
PTCD2Q8WV60 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC18.59■□□□□ 0.57
PTCD2Q8WV60 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
PTCD2Q8WV60 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
PTCD2Q8WV60 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
PTCD2Q8WV60 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
PTCD2Q8WV60 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC18.58■□□□□ 0.57
PTCD2Q8WV60 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC18.58■□□□□ 0.57
PTCD2Q8WV60 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC18.58■□□□□ 0.57
PTCD2Q8WV60 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
PTCD2Q8WV60 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.57
PTCD2Q8WV60 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
PTCD2Q8WV60 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
PTCD2Q8WV60 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
PTCD2Q8WV60 ILF2-202ENST00000368681 726 ntTSL 2 BASIC18.58■□□□□ 0.56
PTCD2Q8WV60 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
PTCD2Q8WV60 AC012497.1-201ENST00000429392 575 ntBASIC18.58■□□□□ 0.56
PTCD2Q8WV60 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
PTCD2Q8WV60 AC022616.7-201ENST00000525383 220 ntBASIC18.58■□□□□ 0.56
PTCD2Q8WV60 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC18.58■□□□□ 0.56
PTCD2Q8WV60 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PTCD2Q8WV60 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
PTCD2Q8WV60 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PTCD2Q8WV60 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.58■□□□□ 0.56
PTCD2Q8WV60 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC18.58■□□□□ 0.56
PTCD2Q8WV60 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms