Protein–RNA interactions for Protein: Q8WV44

TRIM41, E3 ubiquitin-protein ligase TRIM41, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41Q8WV44 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC31.43■■■□□ 2.62
TRIM41Q8WV44 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC31.43■■■□□ 2.62
TRIM41Q8WV44 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC31.43■■■□□ 2.62
TRIM41Q8WV44 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
TRIM41Q8WV44 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
TRIM41Q8WV44 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
TRIM41Q8WV44 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC31.43■■■□□ 2.62
TRIM41Q8WV44 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC31.43■■■□□ 2.62
TRIM41Q8WV44 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
TRIM41Q8WV44 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC31.43■■■□□ 2.62
TRIM41Q8WV44 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC31.43■■■□□ 2.62
TRIM41Q8WV44 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC31.42■■■□□ 2.62
TRIM41Q8WV44 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC31.42■■■□□ 2.62
TRIM41Q8WV44 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
TRIM41Q8WV44 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
TRIM41Q8WV44 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC31.42■■■□□ 2.62
TRIM41Q8WV44 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
TRIM41Q8WV44 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
TRIM41Q8WV44 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
TRIM41Q8WV44 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC31.42■■■□□ 2.62
TRIM41Q8WV44 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
TRIM41Q8WV44 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC31.42■■■□□ 2.62
TRIM41Q8WV44 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC31.42■■■□□ 2.62
TRIM41Q8WV44 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC31.42■■■□□ 2.62
TRIM41Q8WV44 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
TRIM41Q8WV44 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
TRIM41Q8WV44 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC31.42■■■□□ 2.62
TRIM41Q8WV44 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
TRIM41Q8WV44 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC31.41■■■□□ 2.62
TRIM41Q8WV44 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
TRIM41Q8WV44 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC31.41■■■□□ 2.62
TRIM41Q8WV44 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC31.41■■■□□ 2.62
TRIM41Q8WV44 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC31.41■■■□□ 2.62
TRIM41Q8WV44 AC010240.3-201ENST00000607688 395 ntBASIC31.41■■■□□ 2.62
TRIM41Q8WV44 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
TRIM41Q8WV44 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
TRIM41Q8WV44 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC31.41■■■□□ 2.62
TRIM41Q8WV44 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC31.41■■■□□ 2.62
TRIM41Q8WV44 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
TRIM41Q8WV44 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
TRIM41Q8WV44 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
TRIM41Q8WV44 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
TRIM41Q8WV44 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
TRIM41Q8WV44 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC31.4■■■□□ 2.62
TRIM41Q8WV44 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC31.4■■■□□ 2.62
TRIM41Q8WV44 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
TRIM41Q8WV44 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC31.4■■■□□ 2.62
TRIM41Q8WV44 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC31.4■■■□□ 2.62
TRIM41Q8WV44 NAT14-202ENST00000587400 416 ntTSL 5 BASIC31.4■■■□□ 2.62
TRIM41Q8WV44 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
TRIM41Q8WV44 CAND2-206ENST00000626378 333 ntTSL 5 BASIC31.4■■■□□ 2.62
TRIM41Q8WV44 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC31.4■■■□□ 2.62
TRIM41Q8WV44 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC31.4■■■□□ 2.62
TRIM41Q8WV44 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC31.4■■■□□ 2.62
TRIM41Q8WV44 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC31.4■■■□□ 2.62
TRIM41Q8WV44 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC31.4■■■□□ 2.62
TRIM41Q8WV44 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
TRIM41Q8WV44 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
TRIM41Q8WV44 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
TRIM41Q8WV44 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC31.39■■■□□ 2.62
TRIM41Q8WV44 MED22-202ENST00000371999 987 ntTSL 3 BASIC31.39■■■□□ 2.62
TRIM41Q8WV44 SYS1-203ENST00000414310 795 ntTSL 3 BASIC31.39■■■□□ 2.62
TRIM41Q8WV44 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC31.39■■■□□ 2.62
TRIM41Q8WV44 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC31.39■■■□□ 2.62
TRIM41Q8WV44 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC31.39■■■□□ 2.62
TRIM41Q8WV44 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC31.39■■■□□ 2.62
TRIM41Q8WV44 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
TRIM41Q8WV44 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC31.39■■■□□ 2.62
TRIM41Q8WV44 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC31.39■■■□□ 2.62
TRIM41Q8WV44 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC31.39■■■□□ 2.62
TRIM41Q8WV44 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC31.39■■■□□ 2.62
TRIM41Q8WV44 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC31.39■■■□□ 2.61
TRIM41Q8WV44 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC31.39■■■□□ 2.61
TRIM41Q8WV44 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC31.38■■■□□ 2.61
TRIM41Q8WV44 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
TRIM41Q8WV44 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC31.38■■■□□ 2.61
TRIM41Q8WV44 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC31.38■■■□□ 2.61
TRIM41Q8WV44 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
TRIM41Q8WV44 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC31.38■■■□□ 2.61
TRIM41Q8WV44 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC31.38■■■□□ 2.61
TRIM41Q8WV44 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC31.38■■■□□ 2.61
TRIM41Q8WV44 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC31.38■■■□□ 2.61
TRIM41Q8WV44 AC011467.4-201ENST00000594891 528 ntBASIC31.38■■■□□ 2.61
TRIM41Q8WV44 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
TRIM41Q8WV44 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC31.38■■■□□ 2.61
TRIM41Q8WV44 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC31.38■■■□□ 2.61
TRIM41Q8WV44 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC31.38■■■□□ 2.61
TRIM41Q8WV44 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC31.38■■■□□ 2.61
TRIM41Q8WV44 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC31.38■■■□□ 2.61
TRIM41Q8WV44 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
TRIM41Q8WV44 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC31.38■■■□□ 2.61
TRIM41Q8WV44 SNAI3-AS1-205ENST00000568633 2096 ntBASIC31.37■■■□□ 2.61
TRIM41Q8WV44 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC31.37■■■□□ 2.61
TRIM41Q8WV44 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
TRIM41Q8WV44 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
TRIM41Q8WV44 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
TRIM41Q8WV44 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
TRIM41Q8WV44 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC31.37■■■□□ 2.61
TRIM41Q8WV44 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC31.37■■■□□ 2.61
TRIM41Q8WV44 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms