Protein–RNA interactions for Protein: Q8NFW1

COL22A1, Collagen alpha-1(XXII) chain, humanhuman

Predicted RBP Predictions only

Length 1,626 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL22A1Q8NFW1 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC24.43■■□□□ 1.5
COL22A1Q8NFW1 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC24.43■■□□□ 1.5
COL22A1Q8NFW1 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
COL22A1Q8NFW1 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
COL22A1Q8NFW1 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC24.43■■□□□ 1.5
COL22A1Q8NFW1 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC24.43■■□□□ 1.5
COL22A1Q8NFW1 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC24.43■■□□□ 1.5
COL22A1Q8NFW1 SRP19-202ENST00000445150 833 ntTSL 2 BASIC24.43■■□□□ 1.5
COL22A1Q8NFW1 BX005266.1-201ENST00000473402 457 ntBASIC24.43■■□□□ 1.5
COL22A1Q8NFW1 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC24.43■■□□□ 1.5
COL22A1Q8NFW1 AL513190.1-201ENST00000621254 727 ntBASIC24.43■■□□□ 1.5
COL22A1Q8NFW1 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC24.43■■□□□ 1.5
COL22A1Q8NFW1 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
COL22A1Q8NFW1 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
COL22A1Q8NFW1 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
COL22A1Q8NFW1 AC097374.2-201ENST00000618617 1306 ntBASIC24.43■■□□□ 1.5
COL22A1Q8NFW1 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC24.43■■□□□ 1.5
COL22A1Q8NFW1 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC24.43■■□□□ 1.5
COL22A1Q8NFW1 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
COL22A1Q8NFW1 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
COL22A1Q8NFW1 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
COL22A1Q8NFW1 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC24.43■■□□□ 1.5
COL22A1Q8NFW1 AC108073.2-201ENST00000464002 357 ntBASIC24.43■■□□□ 1.5
COL22A1Q8NFW1 CIPC-205ENST00000555437 566 ntTSL 3 BASIC24.43■■□□□ 1.5
COL22A1Q8NFW1 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
COL22A1Q8NFW1 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC24.42■■□□□ 1.5
COL22A1Q8NFW1 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC24.42■■□□□ 1.5
COL22A1Q8NFW1 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC24.42■■□□□ 1.5
COL22A1Q8NFW1 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
COL22A1Q8NFW1 PRSS29P-201ENST00000440800 595 ntBASIC24.42■■□□□ 1.5
COL22A1Q8NFW1 AC018845.2-201ENST00000568326 409 ntBASIC24.42■■□□□ 1.5
COL22A1Q8NFW1 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC24.42■■□□□ 1.5
COL22A1Q8NFW1 AC005593.1-201ENST00000624894 515 ntBASIC24.42■■□□□ 1.5
COL22A1Q8NFW1 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
COL22A1Q8NFW1 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC24.42■■□□□ 1.5
COL22A1Q8NFW1 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
COL22A1Q8NFW1 KLK8-202ENST00000320838 456 ntTSL 5 BASIC24.41■■□□□ 1.5
COL22A1Q8NFW1 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC24.41■■□□□ 1.5
COL22A1Q8NFW1 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC24.41■■□□□ 1.5
COL22A1Q8NFW1 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
COL22A1Q8NFW1 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC24.41■■□□□ 1.5
COL22A1Q8NFW1 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC24.41■■□□□ 1.5
COL22A1Q8NFW1 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC24.41■■□□□ 1.5
COL22A1Q8NFW1 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC24.41■■□□□ 1.5
COL22A1Q8NFW1 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
COL22A1Q8NFW1 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC24.41■■□□□ 1.5
COL22A1Q8NFW1 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC24.41■■□□□ 1.5
COL22A1Q8NFW1 AC093028.1-201ENST00000622998 982 ntBASIC24.41■■□□□ 1.5
COL22A1Q8NFW1 AL022326.1-202ENST00000641533 845 ntBASIC24.41■■□□□ 1.5
COL22A1Q8NFW1 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC24.41■■□□□ 1.5
COL22A1Q8NFW1 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC24.41■■□□□ 1.5
COL22A1Q8NFW1 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
COL22A1Q8NFW1 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
COL22A1Q8NFW1 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
COL22A1Q8NFW1 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
COL22A1Q8NFW1 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
COL22A1Q8NFW1 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
COL22A1Q8NFW1 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
COL22A1Q8NFW1 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC24.4■■□□□ 1.5
COL22A1Q8NFW1 GOLGA6L17P-202ENST00000614358 1398 ntBASIC24.4■■□□□ 1.5
COL22A1Q8NFW1 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC24.4■■□□□ 1.5
COL22A1Q8NFW1 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
COL22A1Q8NFW1 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC24.4■■□□□ 1.5
COL22A1Q8NFW1 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC24.4■■□□□ 1.5
COL22A1Q8NFW1 KRT18P65-201ENST00000439811 1286 ntBASIC24.4■■□□□ 1.5
COL22A1Q8NFW1 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
COL22A1Q8NFW1 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC24.4■■□□□ 1.5
COL22A1Q8NFW1 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC24.4■■□□□ 1.5
COL22A1Q8NFW1 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC24.4■■□□□ 1.5
COL22A1Q8NFW1 PMPCAP1-201ENST00000508114 1576 ntBASIC24.4■■□□□ 1.5
COL22A1Q8NFW1 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
COL22A1Q8NFW1 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC24.4■■□□□ 1.5
COL22A1Q8NFW1 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC24.4■■□□□ 1.5
COL22A1Q8NFW1 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
COL22A1Q8NFW1 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
COL22A1Q8NFW1 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC24.39■■□□□ 1.5
COL22A1Q8NFW1 RNF34-208ENST00000555076 593 ntTSL 3 BASIC24.39■■□□□ 1.5
COL22A1Q8NFW1 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC24.39■■□□□ 1.5
COL22A1Q8NFW1 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC24.39■■□□□ 1.5
COL22A1Q8NFW1 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
COL22A1Q8NFW1 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC24.39■■□□□ 1.49
COL22A1Q8NFW1 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC24.39■■□□□ 1.49
COL22A1Q8NFW1 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
COL22A1Q8NFW1 AC244107.1-201ENST00000442033 332 ntBASIC24.39■■□□□ 1.49
COL22A1Q8NFW1 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
COL22A1Q8NFW1 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC24.39■■□□□ 1.49
COL22A1Q8NFW1 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC24.39■■□□□ 1.49
COL22A1Q8NFW1 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC24.39■■□□□ 1.49
COL22A1Q8NFW1 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC24.39■■□□□ 1.49
COL22A1Q8NFW1 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC24.39■■□□□ 1.49
COL22A1Q8NFW1 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC24.39■■□□□ 1.49
COL22A1Q8NFW1 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC24.39■■□□□ 1.49
COL22A1Q8NFW1 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC24.39■■□□□ 1.49
COL22A1Q8NFW1 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC24.39■■□□□ 1.49
COL22A1Q8NFW1 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC24.39■■□□□ 1.49
COL22A1Q8NFW1 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC24.38■■□□□ 1.49
COL22A1Q8NFW1 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC24.38■■□□□ 1.49
COL22A1Q8NFW1 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
COL22A1Q8NFW1 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC24.38■■□□□ 1.49
COL22A1Q8NFW1 AC007967.3-201ENST00000434308 558 ntBASIC24.38■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms