Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC17.31■□□□□ 0.36
SIMC1Q8NDZ2 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
SIMC1Q8NDZ2 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SIMC1Q8NDZ2 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SIMC1Q8NDZ2 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC17.31■□□□□ 0.36
SIMC1Q8NDZ2 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
SIMC1Q8NDZ2 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SIMC1Q8NDZ2 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SIMC1Q8NDZ2 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
SIMC1Q8NDZ2 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC17.31■□□□□ 0.36
SIMC1Q8NDZ2 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SIMC1Q8NDZ2 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC17.31■□□□□ 0.36
SIMC1Q8NDZ2 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC17.31■□□□□ 0.36
SIMC1Q8NDZ2 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC17.31■□□□□ 0.36
SIMC1Q8NDZ2 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC17.31■□□□□ 0.36
SIMC1Q8NDZ2 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SIMC1Q8NDZ2 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC17.31■□□□□ 0.36
SIMC1Q8NDZ2 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SIMC1Q8NDZ2 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
SIMC1Q8NDZ2 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SIMC1Q8NDZ2 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
SIMC1Q8NDZ2 AC034236.2-201ENST00000606662 1610 ntBASIC17.31■□□□□ 0.36
SIMC1Q8NDZ2 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
SIMC1Q8NDZ2 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
SIMC1Q8NDZ2 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SIMC1Q8NDZ2 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC17.31■□□□□ 0.36
SIMC1Q8NDZ2 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SIMC1Q8NDZ2 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC17.31■□□□□ 0.36
SIMC1Q8NDZ2 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
SIMC1Q8NDZ2 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SIMC1Q8NDZ2 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SIMC1Q8NDZ2 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC17.3■□□□□ 0.36
SIMC1Q8NDZ2 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
SIMC1Q8NDZ2 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
SIMC1Q8NDZ2 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SIMC1Q8NDZ2 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SIMC1Q8NDZ2 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SIMC1Q8NDZ2 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
SIMC1Q8NDZ2 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SIMC1Q8NDZ2 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SIMC1Q8NDZ2 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC17.3■□□□□ 0.36
SIMC1Q8NDZ2 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SIMC1Q8NDZ2 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
SIMC1Q8NDZ2 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC17.3■□□□□ 0.36
SIMC1Q8NDZ2 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
SIMC1Q8NDZ2 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
SIMC1Q8NDZ2 CD70-202ENST00000423145 881 ntTSL 2 BASIC17.3■□□□□ 0.36
SIMC1Q8NDZ2 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC17.3■□□□□ 0.36
SIMC1Q8NDZ2 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC17.3■□□□□ 0.36
SIMC1Q8NDZ2 PHB2-202ENST00000440277 996 ntTSL 5 BASIC17.3■□□□□ 0.36
SIMC1Q8NDZ2 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC17.3■□□□□ 0.36
SIMC1Q8NDZ2 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC17.3■□□□□ 0.36
SIMC1Q8NDZ2 NAT14-202ENST00000587400 416 ntTSL 5 BASIC17.3■□□□□ 0.36
SIMC1Q8NDZ2 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SIMC1Q8NDZ2 AC018470.1-201ENST00000624790 3129 ntBASIC17.3■□□□□ 0.36
SIMC1Q8NDZ2 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SIMC1Q8NDZ2 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC17.3■□□□□ 0.36
SIMC1Q8NDZ2 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SIMC1Q8NDZ2 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SIMC1Q8NDZ2 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SIMC1Q8NDZ2 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SIMC1Q8NDZ2 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SIMC1Q8NDZ2 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
SIMC1Q8NDZ2 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SIMC1Q8NDZ2 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SIMC1Q8NDZ2 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SIMC1Q8NDZ2 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC17.29■□□□□ 0.36
SIMC1Q8NDZ2 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SIMC1Q8NDZ2 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SIMC1Q8NDZ2 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
SIMC1Q8NDZ2 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC17.29■□□□□ 0.36
SIMC1Q8NDZ2 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SIMC1Q8NDZ2 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
SIMC1Q8NDZ2 MYLKP1-201ENST00000509077 1580 ntBASIC17.29■□□□□ 0.36
SIMC1Q8NDZ2 AC073592.3-201ENST00000625118 1834 ntBASIC17.29■□□□□ 0.36
SIMC1Q8NDZ2 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
SIMC1Q8NDZ2 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SIMC1Q8NDZ2 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SIMC1Q8NDZ2 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC17.29■□□□□ 0.36
SIMC1Q8NDZ2 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SIMC1Q8NDZ2 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC17.29■□□□□ 0.36
SIMC1Q8NDZ2 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SIMC1Q8NDZ2 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SIMC1Q8NDZ2 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC17.29■□□□□ 0.36
SIMC1Q8NDZ2 KRT18P23-201ENST00000435622 1283 ntBASIC17.29■□□□□ 0.36
SIMC1Q8NDZ2 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC17.29■□□□□ 0.36
SIMC1Q8NDZ2 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SIMC1Q8NDZ2 KRT18P41-201ENST00000518924 1277 ntBASIC17.29■□□□□ 0.36
SIMC1Q8NDZ2 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC17.29■□□□□ 0.36
SIMC1Q8NDZ2 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
SIMC1Q8NDZ2 AL138966.2-201ENST00000621997 464 ntBASIC17.29■□□□□ 0.36
SIMC1Q8NDZ2 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC17.29■□□□□ 0.36
SIMC1Q8NDZ2 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC17.29■□□□□ 0.36
SIMC1Q8NDZ2 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SIMC1Q8NDZ2 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC17.29■□□□□ 0.36
SIMC1Q8NDZ2 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SIMC1Q8NDZ2 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
SIMC1Q8NDZ2 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SIMC1Q8NDZ2 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SIMC1Q8NDZ2 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 68.6 ms