Protein–RNA interactions for Protein: Q8NC44

RETREG2, Reticulophagy regulator 2, humanhuman

Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG2Q8NC44 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
RETREG2Q8NC44 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RETREG2Q8NC44 AC104581.1-202ENST00000635932 2618 ntBASIC20.8■□□□□ 0.92
RETREG2Q8NC44 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
RETREG2Q8NC44 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RETREG2Q8NC44 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RETREG2Q8NC44 AC135050.7-201ENST00000624508 2218 ntBASIC20.8■□□□□ 0.92
RETREG2Q8NC44 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RETREG2Q8NC44 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
RETREG2Q8NC44 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RETREG2Q8NC44 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RETREG2Q8NC44 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC20.79■□□□□ 0.92
RETREG2Q8NC44 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RETREG2Q8NC44 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RETREG2Q8NC44 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RETREG2Q8NC44 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
RETREG2Q8NC44 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC20.79■□□□□ 0.92
RETREG2Q8NC44 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC20.79■□□□□ 0.92
RETREG2Q8NC44 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
RETREG2Q8NC44 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC20.79■□□□□ 0.92
RETREG2Q8NC44 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RETREG2Q8NC44 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC20.79■□□□□ 0.92
RETREG2Q8NC44 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RETREG2Q8NC44 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC20.79■□□□□ 0.92
RETREG2Q8NC44 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC20.79■□□□□ 0.92
RETREG2Q8NC44 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC20.79■□□□□ 0.92
RETREG2Q8NC44 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RETREG2Q8NC44 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
RETREG2Q8NC44 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RETREG2Q8NC44 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RETREG2Q8NC44 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RETREG2Q8NC44 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC20.78■□□□□ 0.92
RETREG2Q8NC44 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RETREG2Q8NC44 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RETREG2Q8NC44 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RETREG2Q8NC44 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
RETREG2Q8NC44 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RETREG2Q8NC44 PPIH-202ENST00000372549 327 ntTSL 3 BASIC20.78■□□□□ 0.92
RETREG2Q8NC44 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RETREG2Q8NC44 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RETREG2Q8NC44 KRT8P26-201ENST00000534154 1276 ntBASIC20.78■□□□□ 0.92
RETREG2Q8NC44 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC20.78■□□□□ 0.92
RETREG2Q8NC44 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC20.78■□□□□ 0.92
RETREG2Q8NC44 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC20.78■□□□□ 0.92
RETREG2Q8NC44 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RETREG2Q8NC44 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC20.78■□□□□ 0.92
RETREG2Q8NC44 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
RETREG2Q8NC44 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RETREG2Q8NC44 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC20.78■□□□□ 0.92
RETREG2Q8NC44 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RETREG2Q8NC44 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC20.78■□□□□ 0.92
RETREG2Q8NC44 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RETREG2Q8NC44 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
RETREG2Q8NC44 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
RETREG2Q8NC44 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
RETREG2Q8NC44 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC20.77■□□□□ 0.92
RETREG2Q8NC44 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
RETREG2Q8NC44 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
RETREG2Q8NC44 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
RETREG2Q8NC44 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RETREG2Q8NC44 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RETREG2Q8NC44 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
RETREG2Q8NC44 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RETREG2Q8NC44 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RETREG2Q8NC44 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
RETREG2Q8NC44 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RETREG2Q8NC44 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RETREG2Q8NC44 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RETREG2Q8NC44 FAAHP1-202ENST00000446499 1238 ntBASIC20.77■□□□□ 0.92
RETREG2Q8NC44 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RETREG2Q8NC44 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RETREG2Q8NC44 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC20.77■□□□□ 0.92
RETREG2Q8NC44 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
RETREG2Q8NC44 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC20.77■□□□□ 0.92
RETREG2Q8NC44 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC20.77■□□□□ 0.92
RETREG2Q8NC44 MIR3180-1-201ENST00000580374 94 ntBASIC20.77■□□□□ 0.92
RETREG2Q8NC44 MIR3180-3-201ENST00000584616 94 ntBASIC20.77■□□□□ 0.92
RETREG2Q8NC44 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC20.77■□□□□ 0.92
RETREG2Q8NC44 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
RETREG2Q8NC44 AC083906.6-201ENST00000641366 219 ntBASIC20.77■□□□□ 0.92
RETREG2Q8NC44 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RETREG2Q8NC44 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC20.77■□□□□ 0.92
RETREG2Q8NC44 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC20.77■□□□□ 0.92
RETREG2Q8NC44 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC20.77■□□□□ 0.92
RETREG2Q8NC44 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
RETREG2Q8NC44 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC20.77■□□□□ 0.92
RETREG2Q8NC44 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RETREG2Q8NC44 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.91
RETREG2Q8NC44 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.91
RETREG2Q8NC44 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.91
RETREG2Q8NC44 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
RETREG2Q8NC44 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
RETREG2Q8NC44 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC20.77■□□□□ 0.91
RETREG2Q8NC44 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
RETREG2Q8NC44 AC005082.1-201ENST00000413042 2259 ntBASIC20.76■□□□□ 0.91
RETREG2Q8NC44 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
RETREG2Q8NC44 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
RETREG2Q8NC44 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RETREG2Q8NC44 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
RETREG2Q8NC44 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms