Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
VPS13BQ7Z7G8 YBX1P5-201ENST00000509441 847 ntBASIC11.31□□□□□ -0.6
VPS13BQ7Z7G8 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
VPS13BQ7Z7G8 AL356488.2-201ENST00000602755 427 ntBASIC11.31□□□□□ -0.6
VPS13BQ7Z7G8 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
VPS13BQ7Z7G8 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
VPS13BQ7Z7G8 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
VPS13BQ7Z7G8 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC11.31□□□□□ -0.6
VPS13BQ7Z7G8 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC11.31□□□□□ -0.6
VPS13BQ7Z7G8 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC11.31□□□□□ -0.6
VPS13BQ7Z7G8 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
VPS13BQ7Z7G8 DNAJB3-201ENST00000446806 729 ntBASIC11.31□□□□□ -0.6
VPS13BQ7Z7G8 RBSN-204ENST00000449050 903 ntTSL 2 BASIC11.31□□□□□ -0.6
VPS13BQ7Z7G8 DNAJB3-202ENST00000449667 1266 ntBASIC11.31□□□□□ -0.6
VPS13BQ7Z7G8 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC11.31□□□□□ -0.6
VPS13BQ7Z7G8 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC11.31□□□□□ -0.6
VPS13BQ7Z7G8 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC11.31□□□□□ -0.6
VPS13BQ7Z7G8 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC11.31□□□□□ -0.6
VPS13BQ7Z7G8 KRT8P50-201ENST00000562022 1438 ntBASIC11.31□□□□□ -0.6
VPS13BQ7Z7G8 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC11.31□□□□□ -0.6
VPS13BQ7Z7G8 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
VPS13BQ7Z7G8 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
VPS13BQ7Z7G8 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
VPS13BQ7Z7G8 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
VPS13BQ7Z7G8 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
VPS13BQ7Z7G8 COA5-202ENST00000409997 557 ntTSL 4 BASIC11.31□□□□□ -0.6
VPS13BQ7Z7G8 RPS2P1-201ENST00000434010 821 ntBASIC11.31□□□□□ -0.6
VPS13BQ7Z7G8 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC11.31□□□□□ -0.6
VPS13BQ7Z7G8 AC093909.1-201ENST00000504731 1122 ntBASIC11.31□□□□□ -0.6
VPS13BQ7Z7G8 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC11.31□□□□□ -0.6
VPS13BQ7Z7G8 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC11.31□□□□□ -0.6
VPS13BQ7Z7G8 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC11.31□□□□□ -0.6
VPS13BQ7Z7G8 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC11.31□□□□□ -0.6
VPS13BQ7Z7G8 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC11.31□□□□□ -0.6
VPS13BQ7Z7G8 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC11.3□□□□□ -0.6
VPS13BQ7Z7G8 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC11.3□□□□□ -0.6
VPS13BQ7Z7G8 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
VPS13BQ7Z7G8 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC11.3□□□□□ -0.6
VPS13BQ7Z7G8 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
VPS13BQ7Z7G8 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC11.3□□□□□ -0.6
VPS13BQ7Z7G8 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
VPS13BQ7Z7G8 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
VPS13BQ7Z7G8 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
VPS13BQ7Z7G8 ENSA-205ENST00000361532 792 ntTSL 2 BASIC11.3□□□□□ -0.6
VPS13BQ7Z7G8 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC11.3□□□□□ -0.6
VPS13BQ7Z7G8 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC11.3□□□□□ -0.6
VPS13BQ7Z7G8 CYMP-203ENST00000474680 1263 ntBASIC11.3□□□□□ -0.6
VPS13BQ7Z7G8 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
VPS13BQ7Z7G8 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC11.3□□□□□ -0.6
VPS13BQ7Z7G8 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
VPS13BQ7Z7G8 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC11.3□□□□□ -0.6
VPS13BQ7Z7G8 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC11.3□□□□□ -0.6
VPS13BQ7Z7G8 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
VPS13BQ7Z7G8 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
VPS13BQ7Z7G8 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
VPS13BQ7Z7G8 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
VPS13BQ7Z7G8 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC11.3□□□□□ -0.6
VPS13BQ7Z7G8 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
VPS13BQ7Z7G8 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
VPS13BQ7Z7G8 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
VPS13BQ7Z7G8 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
VPS13BQ7Z7G8 KIRREL3-AS3-201ENST00000404882 831 ntBASIC11.3□□□□□ -0.6
VPS13BQ7Z7G8 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
VPS13BQ7Z7G8 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
VPS13BQ7Z7G8 LINC01711-201ENST00000598340 967 ntBASIC11.3□□□□□ -0.6
VPS13BQ7Z7G8 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC11.3□□□□□ -0.6
VPS13BQ7Z7G8 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
VPS13BQ7Z7G8 AP005117.1-201ENST00000584346 1413 ntBASIC11.3□□□□□ -0.6
VPS13BQ7Z7G8 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
VPS13BQ7Z7G8 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC11.3□□□□□ -0.6
VPS13BQ7Z7G8 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
VPS13BQ7Z7G8 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
VPS13BQ7Z7G8 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC11.3□□□□□ -0.6
VPS13BQ7Z7G8 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC11.3□□□□□ -0.6
VPS13BQ7Z7G8 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC11.3□□□□□ -0.6
VPS13BQ7Z7G8 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC11.3□□□□□ -0.6
VPS13BQ7Z7G8 AC004967.1-201ENST00000453589 447 ntBASIC11.3□□□□□ -0.6
VPS13BQ7Z7G8 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC11.3□□□□□ -0.6
VPS13BQ7Z7G8 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC11.3□□□□□ -0.6
VPS13BQ7Z7G8 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC11.3□□□□□ -0.6
VPS13BQ7Z7G8 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC11.3□□□□□ -0.6
VPS13BQ7Z7G8 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
VPS13BQ7Z7G8 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
VPS13BQ7Z7G8 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
VPS13BQ7Z7G8 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
VPS13BQ7Z7G8 ZNF259P1-201ENST00000407656 1365 ntBASIC11.29□□□□□ -0.6
VPS13BQ7Z7G8 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
VPS13BQ7Z7G8 RPS2P28-201ENST00000314255 741 ntBASIC11.29□□□□□ -0.6
VPS13BQ7Z7G8 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC11.29□□□□□ -0.6
VPS13BQ7Z7G8 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC11.29□□□□□ -0.6
VPS13BQ7Z7G8 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC11.29□□□□□ -0.6
VPS13BQ7Z7G8 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC11.29□□□□□ -0.6
VPS13BQ7Z7G8 NARF-204ENST00000390006 1766 ntTSL 2 BASIC11.29□□□□□ -0.6
VPS13BQ7Z7G8 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC11.29□□□□□ -0.6
VPS13BQ7Z7G8 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
VPS13BQ7Z7G8 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
VPS13BQ7Z7G8 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC11.29□□□□□ -0.6
VPS13BQ7Z7G8 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC11.29□□□□□ -0.6
VPS13BQ7Z7G8 CYP51A1P1-201ENST00000492267 1507 ntBASIC11.29□□□□□ -0.6
VPS13BQ7Z7G8 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms