Protein–RNA interactions for Protein: Q5VT99

LRRC38, Leucine-rich repeat-containing protein 38, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC38Q5VT99 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
LRRC38Q5VT99 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LRRC38Q5VT99 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC19.09■□□□□ 0.65
LRRC38Q5VT99 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC19.09■□□□□ 0.65
LRRC38Q5VT99 AC026471.1-201ENST00000564629 3026 ntBASIC19.09■□□□□ 0.65
LRRC38Q5VT99 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
LRRC38Q5VT99 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LRRC38Q5VT99 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC19.09■□□□□ 0.65
LRRC38Q5VT99 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LRRC38Q5VT99 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
LRRC38Q5VT99 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
LRRC38Q5VT99 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
LRRC38Q5VT99 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
LRRC38Q5VT99 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC19.09■□□□□ 0.65
LRRC38Q5VT99 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC19.09■□□□□ 0.65
LRRC38Q5VT99 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
LRRC38Q5VT99 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
LRRC38Q5VT99 GRAMD4P1-201ENST00000435181 1110 ntBASIC19.09■□□□□ 0.65
LRRC38Q5VT99 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC19.09■□□□□ 0.65
LRRC38Q5VT99 AC128688.1-201ENST00000487626 519 ntBASIC19.09■□□□□ 0.65
LRRC38Q5VT99 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC19.09■□□□□ 0.65
LRRC38Q5VT99 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC19.09■□□□□ 0.65
LRRC38Q5VT99 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LRRC38Q5VT99 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
LRRC38Q5VT99 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
LRRC38Q5VT99 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC19.09■□□□□ 0.65
LRRC38Q5VT99 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC19.09■□□□□ 0.65
LRRC38Q5VT99 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
LRRC38Q5VT99 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
LRRC38Q5VT99 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LRRC38Q5VT99 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LRRC38Q5VT99 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
LRRC38Q5VT99 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
LRRC38Q5VT99 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
LRRC38Q5VT99 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.65
LRRC38Q5VT99 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
LRRC38Q5VT99 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
LRRC38Q5VT99 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
LRRC38Q5VT99 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
LRRC38Q5VT99 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
LRRC38Q5VT99 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
LRRC38Q5VT99 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC19.08■□□□□ 0.64
LRRC38Q5VT99 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
LRRC38Q5VT99 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
LRRC38Q5VT99 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
LRRC38Q5VT99 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
LRRC38Q5VT99 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC19.08■□□□□ 0.64
LRRC38Q5VT99 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
LRRC38Q5VT99 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC19.08■□□□□ 0.64
LRRC38Q5VT99 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC19.08■□□□□ 0.64
LRRC38Q5VT99 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC19.08■□□□□ 0.64
LRRC38Q5VT99 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
LRRC38Q5VT99 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC19.08■□□□□ 0.64
LRRC38Q5VT99 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
LRRC38Q5VT99 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
LRRC38Q5VT99 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
LRRC38Q5VT99 AC067852.2-201ENST00000590513 2313 ntBASIC19.08■□□□□ 0.64
LRRC38Q5VT99 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
LRRC38Q5VT99 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC19.08■□□□□ 0.64
LRRC38Q5VT99 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
LRRC38Q5VT99 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
LRRC38Q5VT99 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC19.08■□□□□ 0.64
LRRC38Q5VT99 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC19.08■□□□□ 0.64
LRRC38Q5VT99 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
LRRC38Q5VT99 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
LRRC38Q5VT99 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC19.08■□□□□ 0.64
LRRC38Q5VT99 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
LRRC38Q5VT99 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LRRC38Q5VT99 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LRRC38Q5VT99 PCDHB18P-201ENST00000524813 2368 ntBASIC19.07■□□□□ 0.64
LRRC38Q5VT99 LINC01126-201ENST00000623515 1646 ntBASIC19.07■□□□□ 0.64
LRRC38Q5VT99 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LRRC38Q5VT99 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
LRRC38Q5VT99 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC19.07■□□□□ 0.64
LRRC38Q5VT99 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LRRC38Q5VT99 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
LRRC38Q5VT99 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LRRC38Q5VT99 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LRRC38Q5VT99 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC19.07■□□□□ 0.64
LRRC38Q5VT99 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
LRRC38Q5VT99 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
LRRC38Q5VT99 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
LRRC38Q5VT99 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LRRC38Q5VT99 INGX-201ENST00000359239 846 ntBASIC19.07■□□□□ 0.64
LRRC38Q5VT99 KIRREL3-AS3-201ENST00000404882 831 ntBASIC19.07■□□□□ 0.64
LRRC38Q5VT99 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
LRRC38Q5VT99 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
LRRC38Q5VT99 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC19.07■□□□□ 0.64
LRRC38Q5VT99 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC19.07■□□□□ 0.64
LRRC38Q5VT99 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC19.07■□□□□ 0.64
LRRC38Q5VT99 MNT-208ENST00000575394 606 ntTSL 4 BASIC19.07■□□□□ 0.64
LRRC38Q5VT99 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC19.07■□□□□ 0.64
LRRC38Q5VT99 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC19.07■□□□□ 0.64
LRRC38Q5VT99 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC19.07■□□□□ 0.64
LRRC38Q5VT99 AC010947.1-201ENST00000623454 693 ntBASIC19.07■□□□□ 0.64
LRRC38Q5VT99 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
LRRC38Q5VT99 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LRRC38Q5VT99 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC19.07■□□□□ 0.64
LRRC38Q5VT99 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
LRRC38Q5VT99 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms