Protein–RNA interactions for Protein: Q5SXM2

SNAPC4, snRNA-activating protein complex subunit 4, humanhuman

Predictions only

Length 1,469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4Q5SXM2 AC008687.5-201ENST00000593746 558 ntBASIC29.92■■■□□ 2.38
SNAPC4Q5SXM2 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC29.92■■■□□ 2.38
SNAPC4Q5SXM2 PWWP2AP1-201ENST00000429776 2273 ntBASIC29.91■■■□□ 2.38
SNAPC4Q5SXM2 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC29.91■■■□□ 2.38
SNAPC4Q5SXM2 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC29.91■■■□□ 2.38
SNAPC4Q5SXM2 AL157384.1-201ENST00000445995 2473 ntBASIC29.91■■■□□ 2.38
SNAPC4Q5SXM2 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC29.91■■■□□ 2.38
SNAPC4Q5SXM2 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC29.91■■■□□ 2.38
SNAPC4Q5SXM2 LINC01006-201ENST00000333319 2292 ntBASIC29.91■■■□□ 2.38
SNAPC4Q5SXM2 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC29.91■■■□□ 2.38
SNAPC4Q5SXM2 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC29.91■■■□□ 2.38
SNAPC4Q5SXM2 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC29.91■■■□□ 2.38
SNAPC4Q5SXM2 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
SNAPC4Q5SXM2 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC29.91■■■□□ 2.38
SNAPC4Q5SXM2 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC29.91■■■□□ 2.38
SNAPC4Q5SXM2 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC29.91■■■□□ 2.38
SNAPC4Q5SXM2 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC29.91■■■□□ 2.38
SNAPC4Q5SXM2 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC29.91■■■□□ 2.38
SNAPC4Q5SXM2 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC29.91■■■□□ 2.38
SNAPC4Q5SXM2 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC29.91■■■□□ 2.38
SNAPC4Q5SXM2 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC29.91■■■□□ 2.38
SNAPC4Q5SXM2 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
SNAPC4Q5SXM2 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC29.91■■■□□ 2.38
SNAPC4Q5SXM2 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC29.91■■■□□ 2.38
SNAPC4Q5SXM2 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC29.91■■■□□ 2.38
SNAPC4Q5SXM2 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC29.91■■■□□ 2.38
SNAPC4Q5SXM2 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
SNAPC4Q5SXM2 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC29.91■■■□□ 2.38
SNAPC4Q5SXM2 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC29.9■■■□□ 2.38
SNAPC4Q5SXM2 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC29.9■■■□□ 2.38
SNAPC4Q5SXM2 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
SNAPC4Q5SXM2 MIR770-201ENST00000390219 98 ntBASIC29.9■■■□□ 2.38
SNAPC4Q5SXM2 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC29.9■■■□□ 2.38
SNAPC4Q5SXM2 MSRA-206ENST00000521209 814 ntTSL 3 BASIC29.9■■■□□ 2.38
SNAPC4Q5SXM2 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC29.9■■■□□ 2.38
SNAPC4Q5SXM2 AP000867.4-201ENST00000641616 219 ntBASIC29.9■■■□□ 2.38
SNAPC4Q5SXM2 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC29.9■■■□□ 2.38
SNAPC4Q5SXM2 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
SNAPC4Q5SXM2 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC29.9■■■□□ 2.38
SNAPC4Q5SXM2 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC29.9■■■□□ 2.38
SNAPC4Q5SXM2 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC29.9■■■□□ 2.38
SNAPC4Q5SXM2 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.38
SNAPC4Q5SXM2 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC29.89■■■□□ 2.38
SNAPC4Q5SXM2 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.38
SNAPC4Q5SXM2 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC29.89■■■□□ 2.38
SNAPC4Q5SXM2 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC29.89■■■□□ 2.38
SNAPC4Q5SXM2 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC29.89■■■□□ 2.38
SNAPC4Q5SXM2 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC29.89■■■□□ 2.38
SNAPC4Q5SXM2 AP002472.1-201ENST00000577490 586 ntBASIC29.89■■■□□ 2.38
SNAPC4Q5SXM2 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC29.89■■■□□ 2.38
SNAPC4Q5SXM2 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC29.89■■■□□ 2.38
SNAPC4Q5SXM2 FP475955.4-201ENST00000623131 1990 ntBASIC29.89■■■□□ 2.38
SNAPC4Q5SXM2 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.37
SNAPC4Q5SXM2 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC29.88■■■□□ 2.37
SNAPC4Q5SXM2 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC29.88■■■□□ 2.37
SNAPC4Q5SXM2 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC29.88■■■□□ 2.37
SNAPC4Q5SXM2 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC29.88■■■□□ 2.37
SNAPC4Q5SXM2 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
SNAPC4Q5SXM2 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC29.88■■■□□ 2.37
SNAPC4Q5SXM2 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC29.88■■■□□ 2.37
SNAPC4Q5SXM2 WBP2-203ENST00000433525 928 ntTSL 2 BASIC29.88■■■□□ 2.37
SNAPC4Q5SXM2 BX005266.1-201ENST00000473402 457 ntBASIC29.88■■■□□ 2.37
SNAPC4Q5SXM2 AC092865.6-201ENST00000642101 219 ntBASIC29.88■■■□□ 2.37
SNAPC4Q5SXM2 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC29.88■■■□□ 2.37
SNAPC4Q5SXM2 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC29.88■■■□□ 2.37
SNAPC4Q5SXM2 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC29.88■■■□□ 2.37
SNAPC4Q5SXM2 SYS1-203ENST00000414310 795 ntTSL 3 BASIC29.87■■■□□ 2.37
SNAPC4Q5SXM2 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC29.87■■■□□ 2.37
SNAPC4Q5SXM2 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC29.87■■■□□ 2.37
SNAPC4Q5SXM2 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC29.87■■■□□ 2.37
SNAPC4Q5SXM2 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC29.87■■■□□ 2.37
SNAPC4Q5SXM2 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC29.87■■■□□ 2.37
SNAPC4Q5SXM2 AL078644.1-201ENST00000609881 752 ntBASIC29.87■■■□□ 2.37
SNAPC4Q5SXM2 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
SNAPC4Q5SXM2 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC29.87■■■□□ 2.37
SNAPC4Q5SXM2 AC079776.2-201ENST00000641154 1609 ntBASIC29.87■■■□□ 2.37
SNAPC4Q5SXM2 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC29.87■■■□□ 2.37
SNAPC4Q5SXM2 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC29.87■■■□□ 2.37
SNAPC4Q5SXM2 NFYC-AS1-201ENST00000606277 1687 ntBASIC29.87■■■□□ 2.37
SNAPC4Q5SXM2 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC29.87■■■□□ 2.37
SNAPC4Q5SXM2 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC29.87■■■□□ 2.37
SNAPC4Q5SXM2 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC29.87■■■□□ 2.37
SNAPC4Q5SXM2 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
SNAPC4Q5SXM2 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC29.87■■■□□ 2.37
SNAPC4Q5SXM2 MIR1199-201ENST00000621445 119 ntBASIC29.87■■■□□ 2.37
SNAPC4Q5SXM2 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC29.86■■■□□ 2.37
SNAPC4Q5SXM2 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC29.86■■■□□ 2.37
SNAPC4Q5SXM2 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC29.86■■■□□ 2.37
SNAPC4Q5SXM2 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
SNAPC4Q5SXM2 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC29.86■■■□□ 2.37
SNAPC4Q5SXM2 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
SNAPC4Q5SXM2 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC29.86■■■□□ 2.37
SNAPC4Q5SXM2 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC29.86■■■□□ 2.37
SNAPC4Q5SXM2 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC29.86■■■□□ 2.37
SNAPC4Q5SXM2 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC29.86■■■□□ 2.37
SNAPC4Q5SXM2 COX20P2-201ENST00000452636 358 ntBASIC29.86■■■□□ 2.37
SNAPC4Q5SXM2 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC29.86■■■□□ 2.37
SNAPC4Q5SXM2 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
SNAPC4Q5SXM2 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC29.85■■■□□ 2.37
SNAPC4Q5SXM2 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms