Protein–RNA interactions for Protein: Q12824

SMARCB1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, humanhuman

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1Q12824 AC074051.2-201ENST00000565115 352 ntBASIC19.24■□□□□ 0.67
SMARCB1Q12824 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC19.24■□□□□ 0.67
SMARCB1Q12824 TBCB-205ENST00000585746 875 ntTSL 3 BASIC19.24■□□□□ 0.67
SMARCB1Q12824 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SMARCB1Q12824 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SMARCB1Q12824 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC19.24■□□□□ 0.67
SMARCB1Q12824 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SMARCB1Q12824 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SMARCB1Q12824 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SMARCB1Q12824 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SMARCB1Q12824 AL031598.1-201ENST00000561511 1773 ntBASIC19.24■□□□□ 0.67
SMARCB1Q12824 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
SMARCB1Q12824 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
SMARCB1Q12824 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC19.23■□□□□ 0.67
SMARCB1Q12824 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SMARCB1Q12824 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SMARCB1Q12824 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SMARCB1Q12824 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SMARCB1Q12824 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SMARCB1Q12824 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SMARCB1Q12824 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SMARCB1Q12824 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC19.23■□□□□ 0.67
SMARCB1Q12824 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
SMARCB1Q12824 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SMARCB1Q12824 IGHV3-47-201ENST00000425060 335 ntBASIC19.23■□□□□ 0.67
SMARCB1Q12824 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
SMARCB1Q12824 ABR-204ENST00000543210 1049 ntTSL 2 BASIC19.23■□□□□ 0.67
SMARCB1Q12824 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SMARCB1Q12824 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC19.23■□□□□ 0.67
SMARCB1Q12824 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SMARCB1Q12824 ABR-217ENST00000572441 563 ntTSL 4 BASIC19.23■□□□□ 0.67
SMARCB1Q12824 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC19.23■□□□□ 0.67
SMARCB1Q12824 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
SMARCB1Q12824 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC19.23■□□□□ 0.67
SMARCB1Q12824 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SMARCB1Q12824 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
SMARCB1Q12824 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SMARCB1Q12824 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC19.22■□□□□ 0.67
SMARCB1Q12824 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SMARCB1Q12824 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC19.22■□□□□ 0.67
SMARCB1Q12824 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SMARCB1Q12824 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SMARCB1Q12824 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SMARCB1Q12824 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SMARCB1Q12824 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SMARCB1Q12824 FAAHP1-202ENST00000446499 1238 ntBASIC19.22■□□□□ 0.67
SMARCB1Q12824 AC091304.2-201ENST00000564639 760 ntBASIC19.22■□□□□ 0.67
SMARCB1Q12824 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC19.22■□□□□ 0.67
SMARCB1Q12824 AC009154.2-201ENST00000621177 724 ntBASIC19.22■□□□□ 0.67
SMARCB1Q12824 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC19.22■□□□□ 0.67
SMARCB1Q12824 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
SMARCB1Q12824 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC19.22■□□□□ 0.67
SMARCB1Q12824 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SMARCB1Q12824 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
SMARCB1Q12824 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC19.21■□□□□ 0.67
SMARCB1Q12824 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
SMARCB1Q12824 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC19.21■□□□□ 0.67
SMARCB1Q12824 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
SMARCB1Q12824 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SMARCB1Q12824 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SMARCB1Q12824 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SMARCB1Q12824 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SMARCB1Q12824 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SMARCB1Q12824 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SMARCB1Q12824 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SMARCB1Q12824 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC19.21■□□□□ 0.67
SMARCB1Q12824 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
SMARCB1Q12824 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
SMARCB1Q12824 POM121L3P-201ENST00000419331 1163 ntBASIC19.21■□□□□ 0.67
SMARCB1Q12824 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SMARCB1Q12824 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC19.21■□□□□ 0.67
SMARCB1Q12824 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC19.21■□□□□ 0.67
SMARCB1Q12824 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC19.21■□□□□ 0.67
SMARCB1Q12824 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
SMARCB1Q12824 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC19.21■□□□□ 0.67
SMARCB1Q12824 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
SMARCB1Q12824 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SMARCB1Q12824 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
SMARCB1Q12824 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SMARCB1Q12824 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC19.21■□□□□ 0.67
SMARCB1Q12824 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC19.21■□□□□ 0.67
SMARCB1Q12824 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC19.21■□□□□ 0.67
SMARCB1Q12824 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC19.21■□□□□ 0.67
SMARCB1Q12824 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SMARCB1Q12824 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SMARCB1Q12824 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
SMARCB1Q12824 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC19.2■□□□□ 0.66
SMARCB1Q12824 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
SMARCB1Q12824 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SMARCB1Q12824 AC004870.1-201ENST00000315132 882 ntBASIC19.2■□□□□ 0.66
SMARCB1Q12824 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SMARCB1Q12824 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
SMARCB1Q12824 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC19.2■□□□□ 0.66
SMARCB1Q12824 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SMARCB1Q12824 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
SMARCB1Q12824 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SMARCB1Q12824 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC19.2■□□□□ 0.66
SMARCB1Q12824 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SMARCB1Q12824 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC19.2■□□□□ 0.66
SMARCB1Q12824 CDV3-207ENST00000508481 661 ntTSL 3 BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms