Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC17.73■□□□□ 0.43
PCDH1Q08174 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCDH1Q08174 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC17.73■□□□□ 0.43
PCDH1Q08174 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCDH1Q08174 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCDH1Q08174 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC17.73■□□□□ 0.43
PCDH1Q08174 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCDH1Q08174 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCDH1Q08174 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC17.73■□□□□ 0.43
PCDH1Q08174 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC17.73■□□□□ 0.43
PCDH1Q08174 SEC1P-202ENST00000473944 940 ntBASIC17.73■□□□□ 0.43
PCDH1Q08174 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PCDH1Q08174 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC17.73■□□□□ 0.43
PCDH1Q08174 AC145285.6-201ENST00000604632 637 ntBASIC17.73■□□□□ 0.43
PCDH1Q08174 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC17.73■□□□□ 0.43
PCDH1Q08174 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PCDH1Q08174 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCDH1Q08174 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCDH1Q08174 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
PCDH1Q08174 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
PCDH1Q08174 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCDH1Q08174 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCDH1Q08174 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PCDH1Q08174 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCDH1Q08174 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PCDH1Q08174 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PCDH1Q08174 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC17.72■□□□□ 0.43
PCDH1Q08174 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDH1Q08174 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC17.72■□□□□ 0.43
PCDH1Q08174 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDH1Q08174 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC17.72■□□□□ 0.43
PCDH1Q08174 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC17.72■□□□□ 0.43
PCDH1Q08174 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDH1Q08174 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PCDH1Q08174 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC17.72■□□□□ 0.43
PCDH1Q08174 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC17.72■□□□□ 0.43
PCDH1Q08174 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDH1Q08174 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PCDH1Q08174 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
PCDH1Q08174 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDH1Q08174 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC17.72■□□□□ 0.43
PCDH1Q08174 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC17.72■□□□□ 0.43
PCDH1Q08174 LINC01568-207ENST00000641790 1380 ntBASIC17.72■□□□□ 0.43
PCDH1Q08174 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDH1Q08174 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDH1Q08174 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PCDH1Q08174 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC17.72■□□□□ 0.43
PCDH1Q08174 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
PCDH1Q08174 SLC25A6P5-201ENST00000435663 894 ntBASIC17.72■□□□□ 0.43
PCDH1Q08174 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC17.72■□□□□ 0.43
PCDH1Q08174 ECEL1P2-202ENST00000465689 757 ntBASIC17.72■□□□□ 0.43
PCDH1Q08174 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDH1Q08174 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC17.72■□□□□ 0.43
PCDH1Q08174 GPX4-207ENST00000589115 812 ntTSL 2 BASIC17.72■□□□□ 0.43
PCDH1Q08174 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
PCDH1Q08174 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDH1Q08174 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
PCDH1Q08174 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
PCDH1Q08174 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
PCDH1Q08174 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
PCDH1Q08174 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC17.72■□□□□ 0.43
PCDH1Q08174 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDH1Q08174 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDH1Q08174 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PCDH1Q08174 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC17.71■□□□□ 0.43
PCDH1Q08174 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCDH1Q08174 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
PCDH1Q08174 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
PCDH1Q08174 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PCDH1Q08174 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.71■□□□□ 0.43
PCDH1Q08174 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC17.71■□□□□ 0.43
PCDH1Q08174 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCDH1Q08174 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PCDH1Q08174 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC17.71■□□□□ 0.43
PCDH1Q08174 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC17.71■□□□□ 0.43
PCDH1Q08174 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC17.71■□□□□ 0.43
PCDH1Q08174 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PCDH1Q08174 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
PCDH1Q08174 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCDH1Q08174 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PCDH1Q08174 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PCDH1Q08174 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC17.71■□□□□ 0.43
PCDH1Q08174 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCDH1Q08174 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCDH1Q08174 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
PCDH1Q08174 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCDH1Q08174 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCDH1Q08174 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC17.71■□□□□ 0.43
PCDH1Q08174 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC17.71■□□□□ 0.42
PCDH1Q08174 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.42
PCDH1Q08174 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDH1Q08174 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC17.7■□□□□ 0.42
PCDH1Q08174 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDH1Q08174 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDH1Q08174 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDH1Q08174 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDH1Q08174 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC17.7■□□□□ 0.42
PCDH1Q08174 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC17.7■□□□□ 0.42
PCDH1Q08174 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PCDH1Q08174 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms