Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NKX6-1P78426 ILF2-202ENST00000368681 726 ntTSL 2 BASIC16.2■□□□□ 0.18
NKX6-1P78426 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC16.2■□□□□ 0.18
NKX6-1P78426 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC16.2■□□□□ 0.18
NKX6-1P78426 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC16.2■□□□□ 0.18
NKX6-1P78426 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC16.2■□□□□ 0.18
NKX6-1P78426 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
NKX6-1P78426 CR769767.2-201ENST00000622735 460 ntBASIC16.2■□□□□ 0.18
NKX6-1P78426 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
NKX6-1P78426 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
NKX6-1P78426 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
NKX6-1P78426 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
NKX6-1P78426 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC16.2■□□□□ 0.18
NKX6-1P78426 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NKX6-1P78426 PKD1P1-201ENST00000458669 6805 ntBASIC16.2■□□□□ 0.18
NKX6-1P78426 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
NKX6-1P78426 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NKX6-1P78426 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NKX6-1P78426 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
NKX6-1P78426 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC16.19■□□□□ 0.18
NKX6-1P78426 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NKX6-1P78426 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC16.19■□□□□ 0.18
NKX6-1P78426 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC16.19■□□□□ 0.18
NKX6-1P78426 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NKX6-1P78426 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC16.19■□□□□ 0.18
NKX6-1P78426 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NKX6-1P78426 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
NKX6-1P78426 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC16.19■□□□□ 0.18
NKX6-1P78426 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NKX6-1P78426 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
NKX6-1P78426 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC16.19■□□□□ 0.18
NKX6-1P78426 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC16.19■□□□□ 0.18
NKX6-1P78426 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC16.19■□□□□ 0.18
NKX6-1P78426 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC16.19■□□□□ 0.18
NKX6-1P78426 AC246785.2-201ENST00000432512 513 ntBASIC16.19■□□□□ 0.18
NKX6-1P78426 MCCD1P1-208ENST00000445732 328 ntBASIC16.19■□□□□ 0.18
NKX6-1P78426 SDHD-206ENST00000528182 754 ntTSL 3 BASIC16.19■□□□□ 0.18
NKX6-1P78426 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC16.19■□□□□ 0.18
NKX6-1P78426 GCSHP2-201ENST00000560971 527 ntBASIC16.19■□□□□ 0.18
NKX6-1P78426 FGF14-AS2-201ENST00000606448 1074 ntBASIC16.19■□□□□ 0.18
NKX6-1P78426 AC092119.3-201ENST00000612618 583 ntBASIC16.19■□□□□ 0.18
NKX6-1P78426 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
NKX6-1P78426 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
NKX6-1P78426 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC16.19■□□□□ 0.18
NKX6-1P78426 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
NKX6-1P78426 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NKX6-1P78426 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NKX6-1P78426 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NKX6-1P78426 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
NKX6-1P78426 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NKX6-1P78426 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
NKX6-1P78426 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NKX6-1P78426 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
NKX6-1P78426 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
NKX6-1P78426 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
NKX6-1P78426 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
NKX6-1P78426 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
NKX6-1P78426 KRT8P32-201ENST00000512863 1461 ntBASIC16.18■□□□□ 0.18
NKX6-1P78426 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NKX6-1P78426 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NKX6-1P78426 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NKX6-1P78426 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NKX6-1P78426 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
NKX6-1P78426 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC16.18■□□□□ 0.18
NKX6-1P78426 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NKX6-1P78426 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
NKX6-1P78426 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NKX6-1P78426 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NKX6-1P78426 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC16.18■□□□□ 0.18
NKX6-1P78426 RN7SL510P-201ENST00000581311 263 ntBASIC16.18■□□□□ 0.18
NKX6-1P78426 NT5C-210ENST00000582160 860 ntTSL 2 BASIC16.18■□□□□ 0.18
NKX6-1P78426 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC16.18■□□□□ 0.18
NKX6-1P78426 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
NKX6-1P78426 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NKX6-1P78426 HYMAI.1-201ENST00000620949 238 ntBASIC16.18■□□□□ 0.18
NKX6-1P78426 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NKX6-1P78426 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC16.18■□□□□ 0.18
NKX6-1P78426 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NKX6-1P78426 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
NKX6-1P78426 AL109659.2-201ENST00000606809 1674 ntBASIC16.18■□□□□ 0.18
NKX6-1P78426 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
NKX6-1P78426 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
NKX6-1P78426 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
NKX6-1P78426 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
NKX6-1P78426 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC16.17■□□□□ 0.18
NKX6-1P78426 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
NKX6-1P78426 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
NKX6-1P78426 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC16.17■□□□□ 0.18
NKX6-1P78426 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NKX6-1P78426 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC16.17■□□□□ 0.18
NKX6-1P78426 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
NKX6-1P78426 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC16.17■□□□□ 0.18
NKX6-1P78426 MIR3180-5-201ENST00000583743 153 ntBASIC16.17■□□□□ 0.18
NKX6-1P78426 AC092329.2-201ENST00000598402 547 ntBASIC16.17■□□□□ 0.18
NKX6-1P78426 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC16.17■□□□□ 0.18
NKX6-1P78426 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
NKX6-1P78426 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
NKX6-1P78426 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
NKX6-1P78426 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC16.17■□□□□ 0.18
NKX6-1P78426 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms