Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
YBX1P67809 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
YBX1P67809 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
YBX1P67809 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC17.93■□□□□ 0.46
YBX1P67809 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
YBX1P67809 FAM210CP-201ENST00000445714 574 ntBASIC17.93■□□□□ 0.46
YBX1P67809 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
YBX1P67809 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
YBX1P67809 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC17.93■□□□□ 0.46
YBX1P67809 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
YBX1P67809 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC17.93■□□□□ 0.46
YBX1P67809 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
YBX1P67809 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC17.93■□□□□ 0.46
YBX1P67809 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC17.93■□□□□ 0.46
YBX1P67809 AL441883.1-201ENST00000566170 1045 ntBASIC17.93■□□□□ 0.46
YBX1P67809 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
YBX1P67809 AC024243.1-201ENST00000609234 778 ntBASIC17.93■□□□□ 0.46
YBX1P67809 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC17.93■□□□□ 0.46
YBX1P67809 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC17.93■□□□□ 0.46
YBX1P67809 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
YBX1P67809 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
YBX1P67809 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
YBX1P67809 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC17.93■□□□□ 0.46
YBX1P67809 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
YBX1P67809 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
YBX1P67809 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
YBX1P67809 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC17.93■□□□□ 0.46
YBX1P67809 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
YBX1P67809 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
YBX1P67809 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC17.92■□□□□ 0.46
YBX1P67809 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
YBX1P67809 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
YBX1P67809 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
YBX1P67809 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
YBX1P67809 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
YBX1P67809 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC17.92■□□□□ 0.46
YBX1P67809 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
YBX1P67809 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
YBX1P67809 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
YBX1P67809 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
YBX1P67809 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
YBX1P67809 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC17.92■□□□□ 0.46
YBX1P67809 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
YBX1P67809 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC17.92■□□□□ 0.46
YBX1P67809 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
YBX1P67809 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC17.92■□□□□ 0.46
YBX1P67809 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
YBX1P67809 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
YBX1P67809 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
YBX1P67809 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
YBX1P67809 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
YBX1P67809 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
YBX1P67809 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
YBX1P67809 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC17.92■□□□□ 0.46
YBX1P67809 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
YBX1P67809 PODN-203ENST00000395871 2744 ntTSL 5 BASIC17.92■□□□□ 0.46
YBX1P67809 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
YBX1P67809 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
YBX1P67809 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
YBX1P67809 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
YBX1P67809 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC17.91■□□□□ 0.46
YBX1P67809 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
YBX1P67809 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
YBX1P67809 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
YBX1P67809 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
YBX1P67809 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
YBX1P67809 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
YBX1P67809 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
YBX1P67809 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
YBX1P67809 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC17.91■□□□□ 0.46
YBX1P67809 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
YBX1P67809 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC17.91■□□□□ 0.46
YBX1P67809 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
YBX1P67809 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC17.91■□□□□ 0.46
YBX1P67809 YBX1P2-201ENST00000489612 999 ntBASIC17.91■□□□□ 0.46
YBX1P67809 GCSHP2-201ENST00000560971 527 ntBASIC17.91■□□□□ 0.46
YBX1P67809 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC17.91■□□□□ 0.46
YBX1P67809 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC17.91■□□□□ 0.46
YBX1P67809 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC17.91■□□□□ 0.46
YBX1P67809 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC17.91■□□□□ 0.46
YBX1P67809 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
YBX1P67809 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
YBX1P67809 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC17.91■□□□□ 0.46
YBX1P67809 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
YBX1P67809 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
YBX1P67809 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
YBX1P67809 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
YBX1P67809 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
YBX1P67809 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
YBX1P67809 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
YBX1P67809 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
YBX1P67809 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
YBX1P67809 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
YBX1P67809 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
YBX1P67809 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
YBX1P67809 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
YBX1P67809 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC17.9■□□□□ 0.46
YBX1P67809 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
YBX1P67809 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC17.9■□□□□ 0.46
YBX1P67809 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms